CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CIMG_10049
(
Coccidioides immitis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
CIMG_10049
T077298_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU03184
M01474_2.00
Neurospora crassa
NDNNVATCNN
NNGATBNNHN
PBM
Najafabadi et al.(2015a)
pTH10252
0.792
0.913
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CIMG_10049T0
C2H2 ZF
271
293
YICRICHKAFSRPSSLRIHSHSH
CIMG_10049T0
C2H2 ZF
299
324
FRCPHAGCGKAFSVRSNMKRHERGCH
Links
Other
C2H2 ZF
family TFs
Other
Coccidioides immitis
TFs
121 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACYPI21993
Acyrthosiphon pisum
ACYPI21993
N
ACYPI39556
Acyrthosiphon pisum
ACYPI39556
N
ACEP18236
Atta cephalotes
ACEP18236
N
Cflo_15241--NA
Camponotus floridanus
Cflo_15241--NA
N
DAPPUDRAFT_253916
Daphnia pulex
DAPPUDRAFT_253916
N
GPLIN_000816000
Globodera pallida
GPLIN_000816000
N
GPUH_0000846101
Gongylonema pulchrum
GPUH_0000846101
N
HMEL013279
Heliconius melpomene
HMEL013279
N
LDEC000062
Leptinotarsa decemlineata
LDEC000062
N
NBR_0000370001
Nippostrongylus brasiliensis
NBR_0000370001
N
OESDEN_23534
Oesophagostomum dentatum
OESDEN_23534
N
SINV24762
Solenopsis invicta
SINV24762
N
SINV24790
Solenopsis invicta
SINV24790
N
L892_g19435
Steinernema scapterisci
L892_g19435
N
SPU_027522
Strongylocentrotus purpuratus
SPU_027522
N