ACEP13085 (Atta cephalotes)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ACEP13085 T079339_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
esg
M06050_2.00
Drosophila melanogaster
CACCTGH

DCAGGTG
B1H
Zhu et al.(2011)
esg_SANGER_2.5_FBgn0001981
0.780 0.858
wor
M03664_2.00
Drosophila melanogaster
GYRACAGGTGYAH

DTRCACCTGTYRC
SELEX
Nitta et al.(2015)
wor_1
0.765 0.832
wor
M03665_2.00
Drosophila melanogaster
DTRCACCTGTYGY

RCRACAGGTGYAH
SELEX
Nitta et al.(2015)
wor_2
0.765 0.832
wor
M06051_2.00
Drosophila melanogaster
CACCTGY

RCAGGTG
B1H
Zhu et al.(2011)
wor_SANGER_2.5_FBgn0001983
0.765 0.832
wor
M06052_2.00
Drosophila melanogaster
VCACCTGY

RCAGGTGB
B1H
Zhu et al.(2011)
wor_SOLEXA_2.5_FBgn0001983
0.765 0.832
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ACEP13085-PA C2H2 ZF 372 394
ACEP13085-PA C2H2 ZF 406 428
ACEP13085-PA C2H2 ZF 432 454
ACEP13085-PA C2H2 ZF 460 482
ACEP13085-PA C2H2 ZF 488 508

Links

Other C2H2 ZF family TFs
Other Atta cephalotes TFs

50 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
evm.TU.supercontig_17.185 Carica papaya evm.TU.supercontig_17.185 N
Ca_15323 Cicer arietinum Ca_15323 N
Ciclev10021399m.g Citrus clementina Ciclev10021399m.g N
gene09561-v1.0-hybrid Fragaria vesca gene09561-v1.0-hybrid N
Gorai.007G034800 Gossypium raimondii Gorai.007G034800 N
Gorai.003G070700 Gossypium raimondii Gorai.003G070700 N
LjSGA_089351.1 Lotus japonicus LjSGA_089351.1 N
MDP0000216231 Malus domestica MDP0000216231 N
MDP0000153290 Malus domestica MDP0000153290 N
cassava35156.m1 Manihot esculenta cassava35156.m1 N
cassava19740.m1 Manihot esculenta cassava19740.m1 N
MTR_4g107450 Medicago truncatula MTR_4g107450 N
GSMUA_Achr5G15570_001 Musa acuminata GSMUA_Achr5G15570_001 N
POPTR_0015s07780 Populus trichocarpa POPTR_0015s07780 N
Pm024623 Prunus mume Pm024623 N
30147.m014053 Ricinus communis 30147.m014053 N
SapurV1A.0161s0030 Salix purpurea SapurV1A.0161s0030 N
Solyc03g113360.2 Solanum lycopersicum Solyc03g113360.2 N
PGSC0003DMG400013182 Solanum tuberosum PGSC0003DMG400013182 N
TCM_030184 Theobroma cacao TCM_030184 N