Bo9g147060 (Brassica oleracea)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 Bo9g147060 T081795_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT5G22990
M06821_2.00 		Arabidopsis thaliana
WCGWHDTCGWYNHNN
NNDNRWCGAHDWCGW		 Dap-seq
OMalley et al.(2016)
AT5G22990_col_a 		0.825 0.913
AT2G15740
M06810_2.00 		Arabidopsis thaliana
WCGHHDYCGWY
RWCGRHDDCGW		 Dap-seq
OMalley et al.(2016)
AT2G15740_col_a 		0.825 0.826
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo9g147060.1 C2H2 ZF 236 259

Links

Other C2H2 ZF family TFs
Other Brassica oleracea TFs

22 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000002010 Ailuropoda melanoleuca ENSAMEG00000002010 I
Alligator_sinensis_CCG004454.1 Alligator sinensis Alligator_sinensis_CCG004454.1 I
AATE006128 Anopheles atroparvus AATE006128 I
ACHR008006 Anopheles christyi ACHR008006 I
ACOM031780 Anopheles coluzzii ACOM031780 I
ACUA015638 Anopheles culicifacies ACUA015638 I
ADAC002711 Anopheles darlingi ADAC002711 I
AFAF008408 Anopheles farauti AFAF008408 I
AFUN008843 Anopheles funestus AFUN008843 I
AGAP006736 Anopheles gambiae AGAP006736 I
AMEC019224 Anopheles melas AMEC019224 I
AMEM008834 Anopheles merus AMEM008834 I
ASIS020148 Anopheles sinensis ASIS020148 I
ENSAMXG00000011871 Astyanax mexicanus ENSAMXG00000011871 I
ENSBTAP00000012119-D1 Bos grunniens ENSBTAP00000012119-D1 I
GLIS2 Bos taurus ENSBTAG00000009199 I
GLIS2 Callithrix jacchus ENSCJAG00000019770 I
GLIS2 Canis familiaris ENSCAFG00000019227 I
ENSCPOG00000004787 Cavia porcellus ENSCPOG00000004787 I
Cmyd_10017688 Chelonia mydas Cmyd_10017688 I
ENSCSAG00000009593 Chlorocebus sabaeus ENSCSAG00000009593 I
CpipJ_CPIJ007837 Culex pipiens CpipJ_CPIJ007837 I
CPIJ007837 Culex quinquefasciatus CPIJ007837 I
GLIS2 Dasypus novemcinctus ENSDNOG00000010899 I
ENSDORG00000014886 Dipodomys ordii ENSDORG00000014886 I
GLIS2 Echinops telfairi ENSETEG00000006418 I
GLIS2 Equus caballus ENSECAG00000020639 I
GLIS2 Erinaceus europaeus ENSEEUG00000007346 I
GLIS2 Felis catus ENSFCAG00000011229 I
GLIS2 Gorilla gorilla ENSGGOG00000004717 I
GLIS2 Homo sapiens ENSG00000126603 D
ENSSTOG00000025049 Ictidomys tridecemlineatus ENSSTOG00000025049 I
ENSLACG00000004164 Latimeria chalumnae ENSLACG00000004164 I
GLIS2 Loxodonta africana ENSLAFG00000018480 I
MESCA001237 Megaselia scalaris MESCA001237 I
GLIS2 Monodelphis domestica ENSMODG00000016375 I
ENSMPUG00000015020 Mustela putorius furo ENSMPUG00000015020 I
Glis2 Mus musculus ENSMUSG00000014303 D
Myotis_brandtii_GLIS2_10028036 Myotis brandtii Myotis_brandtii_GLIS2_10028036 I
GLIS2 Myotis lucifugus ENSMLUG00000008930 I
ENSNLEG00000009834 Nomascus leucogenys ENSNLEG00000009834 I
GLIS2 Ochotona princeps ENSOPRG00000000484 I
GLIS2 Ornithorhynchus anatinus ENSOANG00000010385 I
GLIS2 Oryctolagus cuniculus ENSOCUG00000012971 I
GLIS2 Otolemur garnettii ENSOGAG00000015200 I
ENSOARG00000003260 Ovis aries ENSOARG00000003260 I
GLIS2 Pan troglodytes ENSPTRG00000007714 I
Pvit_18995 Pogona vitticeps Pvit_18995 I
ENSPPYG00000007055 Pongo abelii ENSPPYG00000007055 I
GLIS2 Procavia capensis ENSPCAG00000011063 I
GLIS2 Pteropus vampyrus ENSPVAG00000017802 I
Glis2 Rattus norvegicus ENSRNOG00000004766 I
ENSSHAG00000010956 Sarcophilus harrisii ENSSHAG00000010956 I
SINV25327 Solenopsis invicta SINV25327 I
SPU_010542 Strongylocentrotus purpuratus SPU_010542 I
GLIS2 Sus scrofa ENSSSCG00000023653 I
glis2b Tetraodon nigroviridis ENSTNIG00000009741 I
GLIS2 Tursiops truncatus ENSTTRG00000002711 I
glis2.L Xenopus laevis XB-GENE-6252690 I