CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CPIJ007837
(
Culex quinquefasciatus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
CPIJ007837
T084519_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Glis2
M00129_2.00
Mus musculus
NKACCCCYYNN
NNRRGGGGTMN
PBM
Badis et al.(2009)
Glis2_1757
0.762
0.841
GLIS2
M02887_2.00
Homo sapiens
KACCCCCCRCRDHG
CDHYGYGGGGGGTM
SELEX
Jolma et al.(2013)
GLIS2_1
0.762
0.841
GLIS2
M04449_2.00
Homo sapiens
RCCCCCCRCRWHGH
DCDWYGYGGGGGGY
SELEX
Yin et al.(2017)
GLIS2_eDBD_HT-SELEX
0.762
0.841
GLIS2
M04450_2.00
Homo sapiens
DCWHYGYDGGGGGT
ACCCCCHRCRDWGH
SELEX
Yin et al.(2017)
GLIS2_eDBD_Methyl-HT-SELEX
0.762
0.841
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CPIJ007837-PA
C2H2 ZF
234
256
HECDKCGKCFSRAENLKIHLRSH
CPIJ007837-PA
C2H2 ZF
262
286
YVCPVEGCNKAYSNSSDRFKHTRTH
CPIJ007837-PA
C2H2 ZF
292
318
YVCKVPGCHKRYTDPSSLRKHVKTFKH
Links
Other
C2H2 ZF
family TFs
Other
Culex quinquefasciatus
TFs
48 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MCYG_08565
Arthroderma otae
MCYG_08565
N
A1O1_08259
Capronia coronata
A1O1_08259
N
PV10_02940
Exophiala mesophila
PV10_02940
N
MGYG_08715
Microsporum gypseum
MGYG_08715
N
TEQG_04483
Trichophyton equinum
TEQG_04483
N
H101_03097
Trichophyton interdigitale
H101_03097
N