CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Zfp128
(
Dipodomys ordii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSDORG00000013595
T092897_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF8
M08401_2.00
Homo sapiens
NNBVYGGTAYGYCHHNDH
DHNDDGRCRTACCRBVNN
ChIP-seq
Schmitges et al.(2016)
P17098_1-6.RCADE
0.827
0.986
ZNF8
M07781_2.00
Homo sapiens
RYRTACCRCWKY
RMWGYGGTAYRY
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF8.RCADE.OriginalMapping
0.827
0.986
ZNF8
M08961_2.00
Homo sapiens
TCCATTGTATGGATRTACCACA
TGTGGTAYATCCATACAATGGA
Misc
Kulakovskiy et al.(2013)
ZNF8_HUMAN.H11MO.0.C
0.827
0.986
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDORP00000012780
C2H2 ZF
257
279
YKCTDCGKSFNHNAHLTVHKRIH
ENSDORP00000012780
C2H2 ZF
285
307
YMCKECGKAFSQNSSLVQHQRIH
ENSDORP00000012780
C2H2 ZF
313
335
YKCAECGKSFCHSTHLTVHRRIH
ENSDORP00000012780
C2H2 ZF
341
363
YECQDCGRAFNQNSSLGRHKRTH
ENSDORP00000012780
C2H2 ZF
369
391
YTCSVCGKSFSRTTCLFLHLRTH
ENSDORP00000012780
C2H2 ZF
397
419
FECNHCGKGFRHSSSLAQHQRKH
Links
Other
C2H2 ZF
family TFs
Other
Dipodomys ordii
TFs
22 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSCJAG00000005418
Callithrix jacchus
ENSCJAG00000005418
I
ENSCPOG00000005995
Cavia porcellus
ENSCPOG00000005995
N
ENSCSAG00000006661
Chlorocebus sabaeus
ENSCSAG00000006661
N
ZNF709
Homo sapiens
ENSG00000242852
N
ENSSTOG00000029196
Ictidomys tridecemlineatus
ENSSTOG00000029196
N
ENSP00000404127
Macaca fascicularis
ENSP00000404127
N
ENSNLEG00000012687
Nomascus leucogenys
ENSNLEG00000012687
N
ENSOCUG00000002915
Oryctolagus cuniculus
ENSOCUG00000002915
N
ENSPANG00000020662
Papio anubis
ENSPANG00000020662
N