sp8b (Gasterosteus aculeatus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSGACG00000008062 T095628_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SP8
M02898_2.00 		Homo sapiens
VMCACBCCCMCH
DGKGGGVGTGKB		 SELEX
Jolma et al.(2013)
SP8_1 		0.827 1.000
SP8
M04517_2.00 		Homo sapiens
NMCMCGCCCMYH
DRKGGGCGKGKN		 SELEX
Yin et al.(2017)
SP8_eDBD_HT-SELEX 		0.827 1.000
SP8
M04518_2.00 		Homo sapiens
RHCACGCCCMYH
DRKGGGCGTGDY		 SELEX
Yin et al.(2017)
SP8_eDBD_Methyl-HT-SELEX 		0.827 1.000
SP9
M04645_2.00 		Homo sapiens
VMCMCGCCCMYH
DRKGGGCGKGKB		 SELEX
Yin et al.(2017)
SP9_eDBD_HT-SELEX 		0.827 0.986
SP9
M04646_2.00 		Homo sapiens
RYCACGCCCMYH
DRKGGGCGTGRY		 SELEX
Yin et al.(2017)
SP9_eDBD_Methyl-HT-SELEX 		0.827 0.986
Sp1
M03682_2.00 		Drosophila melanogaster
HNGCCACGCCCARK
MYTGGGCGTGGCND		 SELEX
Nitta et al.(2015)
Sp1_1 		0.814 0.986
Sp1
M06117_2.00 		Drosophila melanogaster
DHYMCGCCCMY
RKGGGCGKRDH		 B1H
Zhu et al.(2011)
Sp1_SANGER_5_FBgn0020378 		0.814 0.986
Sp1
M06118_2.00 		Drosophila melanogaster
NKHHMCGCCCMYNN
NNRKGGGCGKDDMN		 B1H
Zhu et al.(2011)
Sp1_SOLEXA_2.5_FBgn0020378 		0.814 0.986
Sp5
M09016_2.00 		Mus musculus
CYCCKCCYHYHBCYYHBYYYHYHB
VDRDRRRVDRRGVDRDRGGMGGRG		 Misc
Kulakovskiy et al.(2013)
SP5_MOUSE.H11MO.0.C 		0.794 0.928
SP5
M10319_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SP5_Q2 		0.794 0.928
Sp1
M00765_2.00 		Mus musculus
NMCGCCCMY
RKGGGCGKN		 PBM
Weirauch et al.(2013)
pTH0978 		0.774 0.884
Sp1
M08963_2.00 		Mus musculus
CCCBKCYCCKCCCCCNBCYCSBSC
GSVSGRGVNGGGGGMGGRGMVGGG		 Misc
Kulakovskiy et al.(2013)
SP1_MOUSE.H11MO.0.A 		0.774 0.884
Spps
M06159_2.00 		Drosophila melanogaster
KWDRCCMCGCCCMBH
DVKGGGCGKGGYHWM		 B1H
Zhu et al.(2011)
CG5669_SANGER_10_FBgn0039169 		0.771 0.855
Spps
M06160_2.00 		Drosophila melanogaster
BDDGCCMCGCCCMYN
NRKGGGCGKGGCHHV		 B1H
Zhu et al.(2011)
CG5669_SOLEXA_5_FBgn0039169 		0.771 0.855
SP1
M02921_2.00 		Homo sapiens
RCCMCDCCCMH
DKGGGHGKGGY		 SELEX
Jolma et al.(2013)
SP1_1 		0.771 0.870
SP1
M04605_2.00 		Homo sapiens
NWRRCCACGCCCMCH
DGKGGGCGTGGYYWN		 SELEX
Yin et al.(2017)
SP1_eDBD_HT-SELEX 		0.771 0.870
SP1
M08096_2.00 		Homo sapiens
BYCCCKCCCCY
RGGGGMGGGRV		 ChIP-seq
Mathelier et al.(2014)
MA0079.3 		0.771 0.870
SP1
M08363_2.00 		Homo sapiens
CCCHNBCYCCDCCCY
RGGGHGGRGVNDGGG		 ChIP-seq
Schmitges et al.(2016)
P08047.MEME 		0.771 0.870
SP1
M08938_2.00 		Homo sapiens
BCSSSBCCHVGCCCCGCCCCYN
NRGGGGCGGGGCBDGGVSSSGV		 Misc
Kulakovskiy et al.(2013)
SP1_HUMAN.H11MO.0.A 		0.771 0.870
SP1
M10294_2.00 		Homo sapiens
DSCMHGCCYH
DRGGCDKGSH		 Transfac
Matys et al.(2006)
V$SP1_01 		0.771 0.870
SP1
M10295_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SP1_02 		0.771 0.870
SP1
M10296_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SP1_07 		0.771 0.870
SP1
M10297_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SP1_08 		0.771 0.870
SP1
M10298_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SP1_Q2_02 		0.771 0.870
SP1
M10299_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SP1_Q3 		0.771 0.870
SP1
M10300_2.00 		Homo sapiens
VVCCCCGCCCMBN
NVKGGGCGGGGBB		 Transfac
Matys et al.(2006)
V$SP1_Q6 		0.771 0.870
SP1
M04606_2.00 		Homo sapiens
NWRGCCMCGCCCMYH
DRKGGGCGKGGCYWN		 SELEX
Yin et al.(2017)
SP1_eDBD_Methyl-HT-SELEX 		0.771 0.870
Sp7
M09009_2.00 		Mus musculus
VHAVCCTRTAATTW
WAATTAYAGGBTDB		 Misc
Kulakovskiy et al.(2013)
SP7_MOUSE.H11MO.0.A 		0.764 0.855
SP7
M10258_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$OSX_Q3 		0.764 0.855
Sp4
M01862_2.00 		Mus musculus
NMCGCCCMY
RKGGGCGKN		 PBM
Weirauch et al.(2014)
pTH4998 		0.762 0.899
Sp4
M00133_2.00 		Mus musculus
HMCGCCCMYN
NRKGGGCGKD		 PBM
Badis et al.(2009)
Sp4_1011 		0.762 0.899
SP4
M02879_2.00 		Homo sapiens
NWRGCCACGCCCMCHYN
NRDGKGGGCGTGGCYWN		 SELEX
Jolma et al.(2013)
SP4_1 		0.762 0.899
Sp4
M05859_2.00 		Mus musculus
DGNYMCGCCCHNN
NNDGGGCGKRNCH		 SMiLE-seq
Isakova et al.(2017)
SP4 		0.762 0.899
SP4
M08296_2.00 		Homo sapiens
NNVGCYCCKCCYMYH
DRKRGGMGGRGCBNN		 ChIP-seq
Schmitges et al.(2016)
Q02446.MEME 		0.762 0.899
SP4
M08873_2.00 		Homo sapiens
BYHDKCYCCGCCYYYHBSBB
VVSVDRRRGGCGGRGMHDRV		 Misc
Kulakovskiy et al.(2013)
SP4_HUMAN.H11MO.0.A 		0.762 0.899
Sp4
M08975_2.00 		Mus musculus
BYHDKCYCCGCCYYYHBSBB
VVSVDRRRGGCGGRGMHDRV		 Misc
Kulakovskiy et al.(2013)
SP4_MOUSE.H11MO.0.B 		0.762 0.899
SP4
M10165_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SP4_Q3 		0.762 0.899
SP4
M10166_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SP4_Q5 		0.762 0.899
SP3
M02910_2.00 		Homo sapiens
VCCMCRCCCMY
RKGGGYGKGGB		 SELEX
Jolma et al.(2013)
SP3_1 		0.761 0.870
SP3
M04558_2.00 		Homo sapiens
NRCCACGCCCMYH
DRKGGGCGTGGYN		 SELEX
Yin et al.(2017)
SP3_eDBD_HT-SELEX 		0.761 0.870
SP3
M08920_2.00 		Homo sapiens
NBBNVSCCCCKCCCMBBBNN
NNVVVKGGGMGGGGSBNVVN		 Misc
Kulakovskiy et al.(2013)
SP3_HUMAN.H11MO.0.B 		0.761 0.870
SP3
M10263_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SP3_Q3_01 		0.761 0.870
SP3
M10264_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SP3_Q3 		0.761 0.870
SP3
M04559_2.00 		Homo sapiens
NRCCMCGCCCMCH
DGKGGGCGKGGYN		 SELEX
Yin et al.(2017)
SP3_eDBD_Methyl-HT-SELEX 		0.761 0.870
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSGACP00000010668 C2H2 ZF 317 341
ENSGACP00000010668 C2H2 ZF 347 371
ENSGACP00000010668 C2H2 ZF 377 399

Links

Other C2H2 ZF family TFs
Other Gasterosteus aculeatus TFs

587 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000001827 Ailuropoda melanoleuca ENSAMEG00000001827 N 0.000
ENSAMEG00000012533 Ailuropoda melanoleuca ENSAMEG00000012533 N 0.000
Alligator_sinensis_CCG001228.1 Alligator sinensis Alligator_sinensis_CCG001228.1 N 0.000
TCF24 Anolis carolinensis ENSACAG00000016461 N 0.000
ENSAMXG00000005025 Astyanax mexicanus ENSAMXG00000005025 N 0.000
ENSAMXG00000013680 Astyanax mexicanus ENSAMXG00000013680 N 0.000
ENSP00000296096-D1 Bos grunniens ENSP00000296096-D1 N 0.000
TCF23 Bos taurus ENSBTAG00000014813 N 0.000
TCF23 Callithrix jacchus ENSCJAG00000001198 N 0.000
TCF24 Canis familiaris ENSCAFG00000029615 N 0.000
TCF23 Canis familiaris ENSCAFG00000030192 N 0.000
ENSCPOG00000003785 Cavia porcellus ENSCPOG00000003785 N 0.000
TCF24 Cavia porcellus ENSCPOG00000014534 N 0.000
Cmyd_10002847 Chelonia mydas Cmyd_10002847 N 0.000
ENSCSAG00000009631 Chlorocebus sabaeus ENSCSAG00000009631 N 0.000
ENSCSAG00000014111 Chlorocebus sabaeus ENSCSAG00000014111 N 0.000
TCF23 Choloepus hoffmanni ENSCHOG00000004803 N 0.000
CGI_10026943 Crassostrea gigas CGI_10026943 N 0.000
tcf23 Danio rerio ENSDARG00000087381 N 0.000
TCF24 Danio rerio ENSDARG00000086944 N 0.000
TCF24 Dasypus novemcinctus ENSDNOG00000045736 N 0.000
ENSDNOG00000030981 Dasypus novemcinctus ENSDNOG00000030981 N 0.000
Tcf23 Dipodomys ordii ENSDORG00000014403 N 0.000
TCF23 Equus caballus ENSECAG00000021374 N 0.000
TCF23 Erinaceus europaeus ENSEEUG00000007250 N 0.000
TCF23 Felis catus ENSFCAG00000022795 N 0.000
ENSGACG00000002911 Gasterosteus aculeatus ENSGACG00000002911 N 0.000
Gfo_R001999 Geospiza fortis Gfo_R001999 N 0.000
TCF23 Gorilla gorilla ENSGGOG00000002612 N 0.000
TCF24 Gorilla gorilla ENSGGOG00000027653 N 0.000
TCF23 Homo sapiens ENSG00000163792 N 0.000
TCF24 Homo sapiens ENSG00000261787 N 0.000
ENSSTOG00000015523 Ictidomys tridecemlineatus ENSSTOG00000015523 N 0.000
ENSSTOG00000007256 Ictidomys tridecemlineatus ENSSTOG00000007256 N 0.000
ENSLACG00000014458 Latimeria chalumnae ENSLACG00000014458 N 0.000
ENSLACG00000004204 Latimeria chalumnae ENSLACG00000004204 N 0.000
ENSLOCG00000004611 Lepisosteus oculatus ENSLOCG00000004611 N 0.000
ENSLOCG00000015901 Lepisosteus oculatus ENSLOCG00000015901 N 0.000
TCF23 Loxodonta africana ENSLAFG00000014587 N 0.000
ENSP00000296096 Macaca fascicularis ENSP00000296096 N 0.000
TCF23 Macaca mulatta ENSMMUG00000015867 N 0.000
ENSMEUG00000010665 Macropus eugenii ENSMEUG00000010665 N 0.000
TCF23 Microcebus murinus ENSMICG00000017064 N 0.000
TCF23 Monodelphis domestica ENSMODG00000015714 N 0.000
ENSMODG00000024958 Monodelphis domestica ENSMODG00000024958 N 0.000
Tcf23 Mus musculus ENSMUSG00000006642 N 0.000
Tcf24 Mus musculus ENSMUSG00000099032 N 0.000
Myotis_brandtii_TCF23_10031193 Myotis brandtii Myotis_brandtii_TCF23_10031193 N 0.000
ENSNLEG00000003009 Nomascus leucogenys ENSNLEG00000003009 N 0.000
ENSNLEG00000010898 Nomascus leucogenys ENSNLEG00000010898 N 0.000
ENSOPRG00000010556 Ochotona princeps ENSOPRG00000010556 N 0.000
Ogr10845 Ophisaurus gracilis Ogr10845 N 0.000
ENSONIG00000011423 Oreochromis niloticus ENSONIG00000011423 N 0.000
TCF24 Ornithorhynchus anatinus ENSOANG00000002317 N 0.000
TCF23 Ornithorhynchus anatinus ENSOANG00000003936 N 0.000
ENSOCUG00000008655 Oryctolagus cuniculus ENSOCUG00000008655 N 0.000
TCF23 Otolemur garnettii ENSOGAG00000006528 N 0.000
ENSOARG00000019168 Ovis aries ENSOARG00000019168 N 0.000
ENSOARG00000000076 Ovis aries ENSOARG00000000076 N 0.000
TCF23 Pan troglodytes ENSPTRG00000011753 N 0.000
ENSPANG00000009856 Papio anubis ENSPANG00000009856 N 0.000
ENSPANG00000017721 Papio anubis ENSPANG00000017721 N 0.000
ENSPSIG00000014305 Pelodiscus sinensis ENSPSIG00000014305 N 0.000
ENSPFOG00000004192 Poecilia formosa ENSPFOG00000004192 N 0.000
Pvit_15007 Pogona vitticeps Pvit_15007 N 0.000
ENSPPYG00000012560 Pongo abelii ENSPPYG00000012560 N 0.000
ENSPVAG00000015152 Pteropus vampyrus ENSPVAG00000015152 N 0.000
Tcf24 Rattus norvegicus ENSRNOG00000052668 N 0.000
Tcf23 Rattus norvegicus ENSRNOG00000025736 N 0.000
Sakowv30044060m.g Saccoglossus kowalevskii Sakowv30044060m.g N 0.000
ENSSHAG00000012462 Sarcophilus harrisii ENSSHAG00000012462 N 0.000
TCF23 Sus scrofa ENSSSCG00000027409 N 0.000
TCF24 Takifugu rubripes ENSTRUG00000009376 N 0.000
TCF23 Tupaia belangeri ENSTBEG00000006967 N 0.000
TCF24 Tursiops truncatus ENSTTRG00000017150 N 0.000
ENSXMAG00000008880 Xiphophorus maculatus ENSXMAG00000008880 N 0.000