ENSGALG00000015241 (Gallus gallus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSGALG00000015241 T095951_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SNAI2
M00221_2.00 		Homo sapiens
HACYTGH
DCARGTD		 PBM
Barrera et al.(2016)
SNAI2_REF 		0.825 0.991
SNAI2
M02873_2.00 		Homo sapiens
VCACCTGYN
NRCAGGTGB		 SELEX
Jolma et al.(2013)
SNAI2_1 		0.825 0.991
SNAI2
M04392_2.00 		Homo sapiens
YGCACCTGYY
RRCAGGTGCR		 SELEX
Yin et al.(2017)
SNAI2_eDBD_HT-SELEX 		0.825 0.991
SNAI2
M04394_2.00 		Homo sapiens
YRCACCTGYY
RRCAGGTGYR		 SELEX
Yin et al.(2017)
SNAI2_FL_HT-SELEX 		0.825 0.991
SNAI2
M08853_2.00 		Homo sapiens
NVCACCTGYY
RRCAGGTGBN		 Misc
Kulakovskiy et al.(2013)
SNAI2_HUMAN.H11MO.0.A 		0.825 0.991
Snai2
M08973_2.00 		Mus musculus
VNRCACCTGYY
RRCAGGTGYNB		 Misc
Kulakovskiy et al.(2013)
SNAI2_MOUSE.H11MO.0.A 		0.825 0.991
SNAI2
M10102_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SLUG_Q6_01 		0.825 0.991
SNAI2
M10103_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SLUG_Q6_02 		0.825 0.991
SNAI2
M10104_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SLUG_Q6 		0.825 0.991
SNAI2
M00220_2.00 		Homo sapiens
NHACCTGY
RCAGGTDN		 PBM
Barrera et al.(2016)
SNAI2_D119E 		0.825 0.991
SNAI2
M04393_2.00 		Homo sapiens
YRCACCTGYN
NRCAGGTGYR		 SELEX
Yin et al.(2017)
SNAI2_eDBD_Methyl-HT-SELEX 		0.825 0.991
SNAI2
M04395_2.00 		Homo sapiens
YRCACCTGYN
NRCAGGTGYR		 SELEX
Yin et al.(2017)
SNAI2_FL_Methyl-HT-SELEX 		0.825 0.991
SNAI2
M00222_2.00 		Homo sapiens
HACYTGHNNN
NNNDCARGTD		 PBM
Barrera et al.(2016)
SNAI2_T234I 		0.821 0.982
esg
M06050_2.00 		Drosophila melanogaster
CACCTGH
DCAGGTG		 B1H
Zhu et al.(2011)
esg_SANGER_2.5_FBgn0001981 		0.767 0.816
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSGALP00000024548 C2H2 ZF 128 150
ENSGALP00000024548 C2H2 ZF 159 181
ENSGALP00000024548 C2H2 ZF 185 207
ENSGALP00000024548 C2H2 ZF 213 235
ENSGALP00000024548 C2H2 ZF 241 262

Links

Other C2H2 ZF family TFs
Other Gallus gallus TFs

101 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
evm.TU.supercontig_17.185 Carica papaya evm.TU.supercontig_17.185 N
Ca_15323 Cicer arietinum Ca_15323 N
Ciclev10021399m.g Citrus clementina Ciclev10021399m.g N
gene09561-v1.0-hybrid Fragaria vesca gene09561-v1.0-hybrid N
Gorai.007G034800 Gossypium raimondii Gorai.007G034800 N
Gorai.003G070700 Gossypium raimondii Gorai.003G070700 N
MDP0000216231 Malus domestica MDP0000216231 N
cassava19740.m1 Manihot esculenta cassava19740.m1 N
cassava35156.m1 Manihot esculenta cassava35156.m1 N
MTR_4g107450 Medicago truncatula MTR_4g107450 N
POPTR_0012s07390 Populus trichocarpa POPTR_0012s07390 N
POPTR_0015s07780 Populus trichocarpa POPTR_0015s07780 N
Pm024623 Prunus mume Pm024623 N
PRUPE_ppa025223mg Prunus persica PRUPE_ppa025223mg N
30147.m014053 Ricinus communis 30147.m014053 N
SapurV1A.0161s0030 Salix purpurea SapurV1A.0161s0030 N
Solyc03g113360.2 Solanum lycopersicum Solyc03g113360.2 N
PGSC0003DMG400013182 Solanum tuberosum PGSC0003DMG400013182 N
TCM_030184 Theobroma cacao TCM_030184 N