SNAI2 (Gorilla gorilla)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSGGOG00000000959 T096066_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SNAI2
M00221_2.00 		Homo sapiens
HACYTGH
DCARGTD		 PBM
Barrera et al.(2016)
SNAI2_REF 		0.827 1.000
SNAI2
M02873_2.00 		Homo sapiens
VCACCTGYN
NRCAGGTGB		 SELEX
Jolma et al.(2013)
SNAI2_1 		0.827 1.000
SNAI2
M04392_2.00 		Homo sapiens
YGCACCTGYY
RRCAGGTGCR		 SELEX
Yin et al.(2017)
SNAI2_eDBD_HT-SELEX 		0.827 1.000
SNAI2
M04394_2.00 		Homo sapiens
YRCACCTGYY
RRCAGGTGYR		 SELEX
Yin et al.(2017)
SNAI2_FL_HT-SELEX 		0.827 1.000
SNAI2
M08853_2.00 		Homo sapiens
NVCACCTGYY
RRCAGGTGBN		 Misc
Kulakovskiy et al.(2013)
SNAI2_HUMAN.H11MO.0.A 		0.827 1.000
Snai2
M08973_2.00 		Mus musculus
VNRCACCTGYY
RRCAGGTGYNB		 Misc
Kulakovskiy et al.(2013)
SNAI2_MOUSE.H11MO.0.A 		0.827 1.000
SNAI2
M10102_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SLUG_Q6_01 		0.827 1.000
SNAI2
M10103_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SLUG_Q6_02 		0.827 1.000
SNAI2
M10104_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SLUG_Q6 		0.827 1.000
SNAI2
M00220_2.00 		Homo sapiens
NHACCTGY
RCAGGTDN		 PBM
Barrera et al.(2016)
SNAI2_D119E 		0.827 1.000
SNAI2
M04393_2.00 		Homo sapiens
YRCACCTGYN
NRCAGGTGYR		 SELEX
Yin et al.(2017)
SNAI2_eDBD_Methyl-HT-SELEX 		0.827 1.000
SNAI2
M04395_2.00 		Homo sapiens
YRCACCTGYN
NRCAGGTGYR		 SELEX
Yin et al.(2017)
SNAI2_FL_Methyl-HT-SELEX 		0.827 1.000
SNAI2
M00222_2.00 		Homo sapiens
HACYTGHNNN
NNNDCARGTD		 PBM
Barrera et al.(2016)
SNAI2_T234I 		0.823 0.991
esg
M06050_2.00 		Drosophila melanogaster
CACCTGH
DCAGGTG		 B1H
Zhu et al.(2011)
esg_SANGER_2.5_FBgn0001981 		0.767 0.816
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSGGOP00000000945 C2H2 ZF 128 150
ENSGGOP00000000945 C2H2 ZF 159 181
ENSGGOP00000000945 C2H2 ZF 185 207
ENSGGOP00000000945 C2H2 ZF 213 235
ENSGGOP00000000945 C2H2 ZF 241 262

Links

Other C2H2 ZF family TFs
Other Gorilla gorilla TFs

102 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00025p00072580 Amborella trichopoda AMTR_s00025p00072580 I
Aquca_043_00021 Aquilegia coerulea Aquca_043_00021 I
scaffold_401930.1 Arabidopsis lyrata scaffold_401930.1 I
ASR3 Arabidopsis thaliana AT2G33550 D
Bo4g182020 Brassica oleracea Bo4g182020 I
Bo4g043600 Brassica oleracea Bo4g043600 I
Bra021860 Brassica rapa Bra021860 I
Bra005486 Brassica rapa Bra005486 I
PK25885.1 Cannabis sativa PK25885.1 I
Carubv10023675m.g Capsella rubella Carubv10023675m.g I
evm.TU.supercontig_2461.1 Carica papaya evm.TU.supercontig_2461.1 I
Cla001502 Citrullus lanatus Cla001502 I
Ciclev10005329m.g Citrus clementina Ciclev10005329m.g I
Ciclev10033491m.g Citrus clementina Ciclev10033491m.g I
orange1.1g019057m.g Citrus sinensis orange1.1g019057m.g I
orange1.1g038571m.g Citrus sinensis orange1.1g038571m.g I
Cucsa.349220 Cucumis sativus Cucsa.349220 I
Eucgr.B03553 Eucalyptus grandis Eucgr.B03553 I
Thhalv10016974m.g Eutrema salsugineum Thhalv10016974m.g I
GLYMA18G51790 Glycine max GLYMA18G51790 I
GLYMA08G28880 Glycine max GLYMA08G28880 I
Gorai.002G021600 Gossypium raimondii Gorai.002G021600 I
chr1.LjT14I13.140.nd Lotus japonicus chr1.LjT14I13.140.nd I
MDP0000232058 Malus domestica MDP0000232058 I
cassava40545.m1 Manihot esculenta cassava40545.m1 I
cassava13649.valid.m1 Manihot esculenta cassava13649.valid.m1 I
cassava12909.valid.m1 Manihot esculenta cassava12909.valid.m1 I
mgf009760m Mimulus guttatus mgf009760m I
POPTR_0003s16150 Populus trichocarpa POPTR_0003s16150 I
POPTR_0001s13060 Populus trichocarpa POPTR_0001s13060 I
Pm024597 Prunus mume Pm024597 I
30128.m008552 Ricinus communis 30128.m008552 I
SapurV1A.0499s0110 Salix purpurea SapurV1A.0499s0110 I
SapurV1A.2674s0010 Salix purpurea SapurV1A.2674s0010 I
Si017674m.g Setaria italica Si017674m.g I
Solyc04g045430.2 Solanum lycopersicum Solyc04g045430.2 I
VIT_17s0000g00270 Vitis vinifera VIT_17s0000g00270 I
VIT_01s0150g00050 Vitis vinifera VIT_01s0150g00050 I