GLI1 (Gorilla gorilla)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSGGOG00000001974 T096093_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Gli1
M01023_2.00 		Mus musculus
NGACCACCHN
NDGGTGGTCN		 PBM
Peterson et al.(2012)
Gli1 		0.827 1.000
GLI1
M02643_2.00 		Homo sapiens
GACCACCCAMG
CKTGGGTGGTC		 SELEX
Hallikas et al.(2006)
GLI1 		0.827 1.000
Gli1
M08976_2.00 		Mus musculus
RGRCCACCCASV
BSTGGGTGGYCY		 Misc
Kulakovskiy et al.(2013)
GLI1_MOUSE.H11MO.0.C 		0.827 1.000
GLI1
M10176_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI1_Q2 		0.827 1.000
GLI1
M10177_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI1_Q3_01 		0.827 1.000
GLI1
M10178_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI1_Q3 		0.827 1.000
GLI1
M10179_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI_Q6 		0.827 1.000
GLI3
M04416_2.00 		Homo sapiens
VGACCACCCACVNHG
CDNBGTGGGTGGTCB		 SELEX
Yin et al.(2017)
GLI3_eDBD_HT-SELEX 		0.796 0.886
GLI3
M02642_2.00 		Homo sapiens
GACCACCCANK
MNTGGGTGGTC		 SELEX
Hallikas et al.(2006)
GLI3 		0.796 0.886
GLI3
M08875_2.00 		Homo sapiens
VRACCACCCAV
BTGGGTGGTYB		 Misc
Kulakovskiy et al.(2013)
GLI3_HUMAN.H11MO.0.B 		0.796 0.886
GLI3
M10167_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI3_01 		0.796 0.886
GLI3
M10168_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI3_Q5_01 		0.796 0.886
GLI3
M04417_2.00 		Homo sapiens
CWHBGTGGGTGGTCY
RGACCACCCACVDWG		 SELEX
Yin et al.(2017)
GLI3_eDBD_Methyl-HT-SELEX 		0.796 0.886
Gli2
M01024_2.00 		Mus musculus
NGACCACCYN
NRGGTGGTCN		 PBM
Peterson et al.(2012)
Gli2 		0.779 0.851
GLI2
M02875_2.00 		Homo sapiens
GMCCACMCANVNHB
VDNBNTGKGTGGKC		 SELEX
Jolma et al.(2013)
GLI2_1 		0.779 0.851
GLI2
M02876_2.00 		Homo sapiens
GCGACCACVCWR
YWGBGTGGTCGC		 SELEX
Jolma et al.(2013)
GLI2_2 		0.779 0.851
GLI2
M02732_2.00 		Homo sapiens
GACCACMCAN
NTGKGTGGTC		 SELEX
Jolma et al.(2010)
GLI2_monomer 		0.779 0.851
GLI2
M04402_2.00 		Homo sapiens
VGACCACCCACVDHG
CDHBGTGGGTGGTCB		 SELEX
Yin et al.(2017)
GLI2_eDBD_HT-SELEX 		0.779 0.851
GLI2
M02641_2.00 		Homo sapiens
GACCACCCAHG
CDTGGGTGGTC		 SELEX
Hallikas et al.(2006)
GLI2 		0.779 0.851
GLI2
M10114_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI2_Q3 		0.779 0.851
GLI2
M10115_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI2_Q6 		0.779 0.851
GLI2
M04403_2.00 		Homo sapiens
RGACCACCCACVWWG
CWWBGTGGGTGGTCY		 SELEX
Yin et al.(2017)
GLI2_eDBD_Methyl-HT-SELEX 		0.779 0.851
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSGGOP00000001945 C2H2 ZF 171 195
ENSGGOP00000001945 C2H2 ZF 203 230
ENSGGOP00000001945 C2H2 ZF 236 260
ENSGGOP00000001945 C2H2 ZF 266 291
ENSGGOP00000001945 C2H2 ZF 297 322

Links

Other C2H2 ZF family TFs
Other Gorilla gorilla TFs

163 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_02479 Aegilops tauschii F775_02479 N 0.000
F775_25840 Aegilops tauschii F775_25840 I 0.000
BRADI4G44370 Brachypodium distachyon BRADI4G44370 N 0.000
Cagra.15225s0001 Capsella grandiflora Cagra.15225s0001 I 0.000
Cagra.0255s0014 Capsella grandiflora Cagra.0255s0014 I 0.000
Carubv10012720m.g Capsella rubella Carubv10012720m.g I 0.000
Carubv10022162m.g Capsella rubella Carubv10022162m.g I 0.000
Carubv10021420m.g Capsella rubella Carubv10021420m.g I 0.000
MLOC_71897 Hordeum vulgare MLOC_71897 I 0.000
LPERR12G01080 Leersia perrieri LPERR12G01080 N 0.000
LPERR12G01070 Leersia perrieri LPERR12G01070 I 0.000
LPERR11G00970 Leersia perrieri LPERR11G00970 N 0.000
LPERR11G00960 Leersia perrieri LPERR11G00960 I 0.000
GSMUA_Achr5G08580_001 Musa acuminata GSMUA_Achr5G08580_001 I 0.000
OBART11G01100 Oryza barthii OBART11G01100 N 0.000
OBART12G00840 Oryza barthii OBART12G00840 N 0.000
OBART12G00850 Oryza barthii OBART12G00850 N 0.000
OB05G17240 Oryza brachyantha OB05G17240 I 0.000
OB11G10760 Oryza brachyantha OB11G10760 N 0.000
OB12G11030 Oryza brachyantha OB12G11030 N 0.000
ORGLA12G0007600 Oryza glaberrima ORGLA12G0007600 N 0.000
ORGLA09G0026100 Oryza glaberrima ORGLA09G0026100 I 0.000
ORGLA11G0201900 Oryza glaberrima ORGLA11G0201900 N 0.000
ORGLA12G0007500 Oryza glaberrima ORGLA12G0007500 N 0.000
OGLUM12G01400 Oryza glumaepatula OGLUM12G01400 N 0.000
OGLUM11G00850 Oryza glumaepatula OGLUM11G00850 I 0.000
BGIOSGA030113 Oryza indica BGIOSGA030113 I 0.000
BGIOSGA036756 Oryza indica BGIOSGA036756 N 0.000
BGIOSGA034613 Oryza indica BGIOSGA034613 N 0.000
OLONG_002978 Oryza longistaminata OLONG_002978 I 0.000
OMERI11G01570 Oryza meridionalis OMERI11G01570 N 0.000
OMERI11G01520 Oryza meridionalis OMERI11G01520 N 0.000
ONIVA09G03360 Oryza nivara ONIVA09G03360 I 0.000
ONIVA11G01050 Oryza nivara ONIVA11G01050 N 0.000
ONIVA11G01230 Oryza nivara ONIVA11G01230 N 0.000
OPUNC12G00990 Oryza punctata OPUNC12G00990 N 0.000
OPUNC11G00970 Oryza punctata OPUNC11G00970 N 0.000
OPUNC11G00980 Oryza punctata OPUNC11G00980 N 0.000
OPUNC12G00970 Oryza punctata OPUNC12G00970 N 0.000
OS11G0117500 Oryza sativa OS11G0117500 N 0.000
OS12G0116600 Oryza sativa OS12G0116600 N 0.000
OS12G0116700 Oryza sativa OS12G0116700 N 0.000
OS11G0117400 Oryza sativa OS11G0117400 N 0.000
Pavir.J39511 Panicum virgatum Pavir.J39511 I 0.000
Pavir.J34713 Panicum virgatum Pavir.J34713 N 0.000
Pavir.Ha01933 Panicum virgatum Pavir.Ha01933 I 0.000
Pavir.Cb02194 Panicum virgatum Pavir.Cb02194 I 0.000
PDK_20s1314561g002 Phoenix dactylifera PDK_20s1314561g002 I 0.000
Si028202m.g Setaria italica Si028202m.g I 0.000
Si027360m.g Setaria italica Si027360m.g N 0.000
Si019098m.g Setaria italica Si019098m.g N 0.000
Si010832m.g Setaria italica Si010832m.g N 0.000
Si010764m.g Setaria italica Si010764m.g N 0.000
Sb08g002570 Sorghum bicolor Sb08g002570 N 0.000
Sb05g001180 Sorghum bicolor Sb05g001180 N 0.000
TCM_045556 Theobroma cacao TCM_045556 I 0.000
TCM_019689 Theobroma cacao TCM_019689 I 0.000
Traes_2AS_6269D889E Triticum aestivum Traes_2AS_6269D889E I 0.000
Traes_2BS_B65714572 Triticum aestivum Traes_2BS_B65714572 I 0.000
TRIUR3_26571 Triticum urartu TRIUR3_26571 N 0.000
GRMZM2G441031 Zea mays GRMZM2G441031 I 0.000
GRMZM2G169564 Zea mays GRMZM2G169564 N 0.000