ENSLACG00000002734 (Latimeria chalumnae)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSLACG00000002734 T096958_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
FEZF1
M08307_2.00 		Homo sapiens
NNBTGYYYTTTTNNN
NNNAAAARRRCAVNN		 ChIP-seq
Schmitges et al.(2016)
A0PJY2_1-5.RCADE 		0.817 0.993
FEZF1
M08889_2.00 		Homo sapiens
DYTGYYCWTTTN
NAAAWGRRCARH		 Misc
Kulakovskiy et al.(2013)
FEZF1_HUMAN.H11MO.0.C 		0.817 0.993
erm
M03686_2.00 		Drosophila melanogaster
TGATTGCTCWTTT
AAAWGAGCAATCA		 SELEX
Nitta et al.(2015)
CG31670_1 		0.796 0.899
erm
M06128_2.00 		Drosophila melanogaster
KWTGYKCWTTT
AAAWGMRCAWM		 B1H
Zhu et al.(2011)
CG31670_SANGER_5_FBgn0031375 		0.796 0.899
erm
M06129_2.00 		Drosophila melanogaster
BBRTTGCTCWTTTBN
NVAAAWGAGCAAYVV		 B1H
Zhu et al.(2011)
CG31670_SOLEXA_5_FBgn0031375 		0.796 0.899
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLACP00000003055 C2H2 ZF 257 279
ENSLACP00000003055 C2H2 ZF 285 307
ENSLACP00000003055 C2H2 ZF 313 335
ENSLACP00000003055 C2H2 ZF 341 363
ENSLACP00000003055 C2H2 ZF 369 391
ENSLACP00000003055 C2H2 ZF 397 420

Links

Other C2H2 ZF family TFs
Other Latimeria chalumnae TFs

167 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_022_00003 Aquilegia coerulea Aquca_022_00003 I
Aquca_006_00040 Aquilegia coerulea Aquca_006_00040 I
Aquca_003_00556 Aquilegia coerulea Aquca_003_00556 I
ATBZIP53 Arabidopsis lyrata fgenesh2_kg.5__2740__AT3G62420.1 I
BZIP53 Arabidopsis thaliana AT3G62420 D
Bo6g079450 Brassica oleracea Bo6g079450 I
Bra003500 Brassica rapa Bra003500 I
Bra007679 Brassica rapa Bra007679 I
Bra039631 Brassica rapa Bra039631 I
PK07533.1 Cannabis sativa PK07533.1 I
PK03779.1 Cannabis sativa PK03779.1 I
Cagra.0483s0006 Capsella grandiflora Cagra.0483s0006 I
Carubv10018852m.g Capsella rubella Carubv10018852m.g I
evm.TU.supercontig_18.43 Carica papaya evm.TU.supercontig_18.43 I
evm.TU.supercontig_538.1 Carica papaya evm.TU.supercontig_538.1 I
Ca_01004 Cicer arietinum Ca_01004 I
Ca_03512 Cicer arietinum Ca_03512 I
Cla020641 Citrullus lanatus Cla020641 I
Cla016841 Citrullus lanatus Cla016841 I
Ciclev10029834m.g Citrus clementina Ciclev10029834m.g I
Ciclev10022730m.g Citrus clementina Ciclev10022730m.g I
orange1.1g032187m.g Citrus sinensis orange1.1g032187m.g I
orange1.1g044691m.g Citrus sinensis orange1.1g044691m.g I
Cucsa.284240 Cucumis sativus Cucsa.284240 I
Cucsa.109420 Cucumis sativus Cucsa.109420 I
Thhalv10006418m.g Eutrema salsugineum Thhalv10006418m.g I
gene21832-v1.0-hybrid Fragaria vesca gene21832-v1.0-hybrid I
GLYMA12G04440 Glycine max GLYMA12G04440 I
GLYMA19G40390 Glycine max GLYMA19G40390 I
GLYMA11G12240 Glycine max GLYMA11G12240 I
GLYMA03G37790 Glycine max GLYMA03G37790 I
Gorai.001G144200 Gossypium raimondii Gorai.001G144200 I
Gorai.008G065300 Gossypium raimondii Gorai.008G065300 I
Gorai.007G122800 Gossypium raimondii Gorai.007G122800 I
Gorai.003G032100 Gossypium raimondii Gorai.003G032100 I
Gorai.002G126500 Gossypium raimondii Gorai.002G126500 I
Lus10040428.g Linum usitatissimum Lus10040428.g I
Lus10025024.g Linum usitatissimum Lus10025024.g I
Lus10010005.g Linum usitatissimum Lus10010005.g I
MDP0000437680 Malus domestica MDP0000437680 I
MDP0000239026 Malus domestica MDP0000239026 I
MDP0000234798 Malus domestica MDP0000234798 I
MDP0000205823 Malus domestica MDP0000205823 I
MDP0000949327 Malus domestica MDP0000949327 I
cassava23775.valid.m1 Manihot esculenta cassava23775.valid.m1 I
cassava24775.valid.m1 Manihot esculenta cassava24775.valid.m1 I
cassava36049.valid.m1 Manihot esculenta cassava36049.valid.m1 I
cassava40461.m1 Manihot esculenta cassava40461.m1 I
cassava41140.m1 Manihot esculenta cassava41140.m1 I
MTR_1g087040 Medicago truncatula MTR_1g087040 I
mgf018581m Mimulus guttatus mgf018581m I
mgf003466m Mimulus guttatus mgf003466m I
GSMUA_Achr4G03790_001 Musa acuminata GSMUA_Achr4G03790_001 I
GSMUA_Achr2G06540_001 Musa acuminata GSMUA_Achr2G06540_001 I
GSMUA_Achr8G29960_001 Musa acuminata GSMUA_Achr8G29960_001 I
GSMUA_Achr1G12710_001 Musa acuminata GSMUA_Achr1G12710_001 I
GSMUA_Achr11G20700_001 Musa acuminata GSMUA_Achr11G20700_001 I
GSMUA_Achr10G12910_001 Musa acuminata GSMUA_Achr10G12910_001 I
GSMUA_Achr11G05140_001 Musa acuminata GSMUA_Achr11G05140_001 I
POPTR_0002s19720 Populus trichocarpa POPTR_0002s19720 I
POPTR_0004s16560 Populus trichocarpa POPTR_0004s16560 I
POPTR_0009s12250 Populus trichocarpa POPTR_0009s12250 I
POPTR_0014s11590 Populus trichocarpa POPTR_0014s11590 I
PRUPE_ppa013046mg Prunus persica PRUPE_ppa013046mg I
30131.m007078 Ricinus communis 30131.m007078 I
30076.m004659 Ricinus communis 30076.m004659 I
SapurV1A.0158s0220 Salix purpurea SapurV1A.0158s0220 I
SapurV1A.0396s0080 Salix purpurea SapurV1A.0396s0080 I
SapurV1A.3521s0020 Salix purpurea SapurV1A.3521s0020 I
Solyc02g084860.1 Solanum lycopersicum Solyc02g084860.1 I
Solyc02g092090.1 Solanum lycopersicum Solyc02g092090.1 I
PGSC0003DMG400003529 Solanum tuberosum PGSC0003DMG400003529 I
PGSC0003DMG400003701 Solanum tuberosum PGSC0003DMG400003701 I
PGSC0003DMG400021431 Solanum tuberosum PGSC0003DMG400021431 I
PGSC0003DMG400022589 Solanum tuberosum PGSC0003DMG400022589 I
PGSC0003DMG400030946 Solanum tuberosum PGSC0003DMG400030946 I
TCM_004807 Theobroma cacao TCM_004807 I
VIT_03s0038g04450 Vitis vinifera VIT_03s0038g04450 I