ENSLOCG00000004887 (Lepisosteus oculatus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSLOCG00000004887 T097625_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SNAI2
M00221_2.00 		Homo sapiens
HACYTGH
DCARGTD		 PBM
Barrera et al.(2016)
SNAI2_REF 		0.775 0.894
SNAI2
M02873_2.00 		Homo sapiens
VCACCTGYN
NRCAGGTGB		 SELEX
Jolma et al.(2013)
SNAI2_1 		0.775 0.894
SNAI2
M04392_2.00 		Homo sapiens
YGCACCTGYY
RRCAGGTGCR		 SELEX
Yin et al.(2017)
SNAI2_eDBD_HT-SELEX 		0.775 0.894
SNAI2
M04394_2.00 		Homo sapiens
YRCACCTGYY
RRCAGGTGYR		 SELEX
Yin et al.(2017)
SNAI2_FL_HT-SELEX 		0.775 0.894
SNAI2
M08853_2.00 		Homo sapiens
NVCACCTGYY
RRCAGGTGBN		 Misc
Kulakovskiy et al.(2013)
SNAI2_HUMAN.H11MO.0.A 		0.775 0.894
Snai2
M08973_2.00 		Mus musculus
VNRCACCTGYY
RRCAGGTGYNB		 Misc
Kulakovskiy et al.(2013)
SNAI2_MOUSE.H11MO.0.A 		0.775 0.894
SNAI2
M10102_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SLUG_Q6_01 		0.775 0.894
SNAI2
M10103_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SLUG_Q6_02 		0.775 0.894
SNAI2
M10104_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SLUG_Q6 		0.775 0.894
SNAI2
M00220_2.00 		Homo sapiens
NHACCTGY
RCAGGTDN		 PBM
Barrera et al.(2016)
SNAI2_D119E 		0.775 0.894
SNAI2
M04393_2.00 		Homo sapiens
YRCACCTGYN
NRCAGGTGYR		 SELEX
Yin et al.(2017)
SNAI2_eDBD_Methyl-HT-SELEX 		0.775 0.894
SNAI2
M04395_2.00 		Homo sapiens
YRCACCTGYN
NRCAGGTGYR		 SELEX
Yin et al.(2017)
SNAI2_FL_Methyl-HT-SELEX 		0.775 0.894
SNAI2
M00222_2.00 		Homo sapiens
HACYTGHNNN
NNNDCARGTD		 PBM
Barrera et al.(2016)
SNAI2_T234I 		0.771 0.885
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLOCP00000005873 C2H2 ZF 23 45
ENSLOCP00000005873 C2H2 ZF 46 76
ENSLOCP00000005873 C2H2 ZF 80 102
ENSLOCP00000005873 C2H2 ZF 108 130
ENSLOCP00000005873 C2H2 ZF 136 156

Links

Other C2H2 ZF family TFs
Other Lepisosteus oculatus TFs

65 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000009606 Ailuropoda melanoleuca ENSAMEG00000009606 I 0.775
Alligator_sinensis_CCG016283.1 Alligator sinensis Alligator_sinensis_CCG016283.1 I 0.775
ENSAPLG00000003920 Anas platyrhynchos ENSAPLG00000003920 I 0.775
SNAI2 Anolis carolinensis ENSACAG00000012332 I 0.775
Afo_R005870 Aptenodytes forsteri Afo_R005870 I 0.775
ENSAMXG00000011013 Astyanax mexicanus ENSAMXG00000011013 I 0.816
ENSP00000020945-D1 Bos grunniens ENSP00000020945-D1 I 0.768
SNAI2 Bos taurus ENSBTAG00000013227 I 0.768
Brh_R006038 Buceros rhinoceros Brh_R006038 I 0.775
SNAI2 Callithrix jacchus ENSCJAG00000013499 I 0.775
Aan_R012932 Calypte anna Aan_R012932 I 0.775
SNAI2 Canis familiaris ENSCAFG00000006638 I 0.775
ENSCPOG00000014827 Cavia porcellus ENSCPOG00000014827 I 0.775
ENSCSAG00000014787 Chlorocebus sabaeus ENSCSAG00000014787 I 0.775
SNAI2 Choloepus hoffmanni ENSCHOG00000007046 I 0.775
SNAI2 Dasypus novemcinctus ENSDNOG00000035997 I 0.775
SNAI2 Equus caballus ENSECAG00000010120 I 0.775
SNAI2 Felis catus ENSFCAG00000015779 I 0.775
ENSFALG00000005762 Ficedula albicollis ENSFALG00000005762 I 0.775
ENSGALG00000015241 Gallus gallus ENSGALG00000015241 I 0.775
snai2 Gasterosteus aculeatus ENSGACG00000017935 I 0.758
Gfo_R012649 Geospiza fortis Gfo_R012649 I 0.775
SNAI2 Gorilla gorilla ENSGGOG00000000959 I 0.775
SNAI2 Homo sapiens ENSG00000019549 D 0.775
ENSSTOG00000028743 Ictidomys tridecemlineatus ENSSTOG00000028743 I 0.775
ENSLACG00000004705 Latimeria chalumnae ENSLACG00000004705 I 0.793
ENSLACG00000005413 Latimeria chalumnae ENSLACG00000005413 I 0.775
SNAI2 Loxodonta africana ENSLAFG00000009299 I 0.775
ENSP00000380034 Macaca fascicularis ENSP00000380034 I 0.775
SNAI2 Macaca mulatta ENSMMUG00000016195 I 0.775
ENSMEUG00000009510 Macropus eugenii ENSMEUG00000009510 I 0.779
SNAI2 Meleagris gallopavo ENSMGAG00000010813 I 0.775
SNAI2 Microcebus murinus ENSMICG00000000335 I 0.775
SNAI2 Monodelphis domestica ENSMODG00000010173 I 0.775
ENSMPUG00000010793 Mustela putorius furo ENSMPUG00000010793 I 0.775
Snai2 Mus musculus ENSMUSG00000022676 D 0.775
Myotis_brandtii_Snai2_10018131 Myotis brandtii Myotis_brandtii_Snai2_10018131 I 0.775
SNAI2 Myotis lucifugus ENSMLUG00000001086 I 0.775
ENSNLEG00000013421 Nomascus leucogenys ENSNLEG00000013421 I 0.775
Ogr04681 Ophisaurus gracilis Ogr04681 I 0.775
SNAI2 Ornithorhynchus anatinus ENSOANG00000007267 I 0.775
SNAI2 Oryctolagus cuniculus ENSOCUG00000012254 I 0.775
SNAI2 Otolemur garnettii ENSOGAG00000010500 I 0.775
ENSOARG00000013030 Ovis aries ENSOARG00000013030 I 0.768
SNAI2 Pan troglodytes ENSPTRG00000020235 I 0.775
ENSPANG00000017540 Papio anubis ENSPANG00000017540 I 0.775
ENSPSIG00000016395 Pelodiscus sinensis ENSPSIG00000016395 I 0.775
ENSPSIG00000004262 Pelodiscus sinensis ENSPSIG00000004262 N 0.773
Pvit_15376 Pogona vitticeps Pvit_15376 I 0.775
ENSPPYG00000018578 Pongo abelii ENSPPYG00000018578 I 0.775
SNAI2 Procavia capensis ENSPCAG00000001788 I 0.775
SNAI2 Pteropus vampyrus ENSPVAG00000009457 I 0.775
Snai2 Rattus norvegicus ENSRNOG00000047699 I 0.775
ENSSHAG00000004205 Sarcophilus harrisii ENSSHAG00000004205 I 0.775
ENSSSCG00000024404 Sus scrofa ENSSSCG00000024404 I 0.767
ENSSSCG00000026570 Sus scrofa ENSSSCG00000026570 I 0.767
SNAI2 Taeniopygia guttata ENSTGUG00000010914 I 0.775
Tal_R003673 Tyto alba Tal_R003673 I 0.775
AAB34088 Xenopus laevis AAB34088 I 0.775
AAK54137 Xenopus laevis AAK54137 I 0.775
AAK54139 Xenopus laevis AAK54139 I 0.775
snai2.L Xenopus laevis XB-GENE-6255814 I 0.775
snai2.S Xenopus laevis XB-GENE-865699 I 0.775
AAK54135 Xenopus tropicalis AAK54135 I 0.775
snai2 Xenopus tropicalis XB-GENE-487371 I 0.775