OVOL2 (Monodelphis domestica)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSMODG00000005504 T099821_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
OVOL2
M00235_2.00
Homo sapiens
NCCGYTANNN

NNNTARCGGN
PBM
Barrera et al.(2016)
OVOL2_REF
0.819 0.957
OVOL2
M04445_2.00
Homo sapiens
NNHCCGYTANNHN

NDNNTARCGGDNN
SELEX
Yin et al.(2017)
OVOL2_eDBD_HT-SELEX
0.819 0.957
OVOL2
M04447_2.00
Homo sapiens
DDWCCGTTABNHN

NDNVTAACGGWHH
SELEX
Yin et al.(2017)
OVOL2_FL_HT-SELEX
0.819 0.957
OVOL2
M10207_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MOVOB_01
0.819 0.957
OVOL2
M04446_2.00
Homo sapiens
NNWCCGTTANNHN

NDNNTAACGGWNN
SELEX
Yin et al.(2017)
OVOL2_eDBD_Methyl-HT-SELEX
0.819 0.957
OVOL2
M04448_2.00
Homo sapiens
DDWCCGTTABNHN

NDNVTAACGGWHH
SELEX
Yin et al.(2017)
OVOL2_FL_Methyl-HT-SELEX
0.819 0.957
Ovol2
M08993_2.00
Mus musculus
HCCGTTAN

NTAACGGD
Misc
Kulakovskiy et al.(2013)
OVOL2_MOUSE.H11MO.0.C
0.810 0.946
OVOL2
M00234_2.00
Homo sapiens
NCCGYTANNN

NNNTARCGGN
PBM
Barrera et al.(2016)
OVOL2_D228E
0.764 0.946
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSMODP00000006810 C2H2 ZF 111 133
ENSMODP00000006810 C2H2 ZF 139 161
ENSMODP00000006810 C2H2 ZF 167 190
ENSMODP00000006810 C2H2 ZF 206 229
ENSMODP00000006812 C2H2 ZF 125 147
ENSMODP00000006812 C2H2 ZF 153 175
ENSMODP00000006812 C2H2 ZF 181 204
ENSMODP00000006812 C2H2 ZF 220 243

Links

Other C2H2 ZF family TFs
Other Monodelphis domestica TFs

55 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
F775_12975 Aegilops tauschii F775_12975 N
AMTR_s00006p00259200 Amborella trichopoda AMTR_s00006p00259200 I
BRADI3G02980 Brachypodium distachyon BRADI3G02980 N
MLOC_63436 Hordeum vulgare MLOC_63436 N
OBART02G02570 Oryza barthii OBART02G02570 N
ORGLA02G0024700 Oryza glaberrima ORGLA02G0024700 N
OGLUM02G02590 Oryza glumaepatula OGLUM02G02590 N
BGIOSGA007184 Oryza indica BGIOSGA007184 N
ONIVA02G02510 Oryza nivara ONIVA02G02510 N
ORUFI02G02580 Oryza rufipogon ORUFI02G02580 N
OS02G0132500 Oryza sativa OS02G0132500 N
gw1.83.117.1 Physcomitrella patens gw1.83.117.1 I
Sb04g002700 Sorghum bicolor Sb04g002700 N
Traes_6AS_FDF16F4EA Triticum aestivum Traes_6AS_FDF16F4EA N
GRMZM2G361611 Zea mays GRMZM2G361611 N
GRMZM2G444748 Zea mays GRMZM2G444748 N