ZFX (Oryctolagus cuniculus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSOCUG00000003815 T102967_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZFX
M08850_2.00 		Homo sapiens
YBVGGCCTVS
SBAGGCCBVR		 Misc
Kulakovskiy et al.(2013)
ZFX_HUMAN.H11MO.0.A 		0.809 0.997
ZFX
M10098_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ZFX_01 		0.809 0.997
Zfx
M08100_2.00 		Mus musculus
BBVRSCBVGGCCTV
BAGGCCBVGSYBVV		 ChIP-seq
Mathelier et al.(2014)
MA0146.2 		0.804 0.990
Zfx
M09017_2.00 		Mus musculus
VVSVSBNBBAGGCCBVGSH
DSCBVGGCCTVVNVSBSBB		 Misc
Kulakovskiy et al.(2013)
ZFX_MOUSE.H11MO.0.B 		0.804 0.990
Zfx
M09517_2.00 		Mus musculus
BNAGGCCT
AGGCCTNV		 Misc
Heinz et al.(2010)
mES-Zfx_GSE11431 		0.804 0.990
Zfx
M00788_2.00 		Mus musculus
NRGGCCNNN
NNNGGCCYN		 PBM
Weirauch et al.(2013)
pTH2933 		0.803 0.987
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSOCUP00000003308 C2H2 ZF 418 440
ENSOCUP00000003308 C2H2 ZF 449 471
ENSOCUP00000003308 C2H2 ZF 481 503
ENSOCUP00000003308 C2H2 ZF 512 535
ENSOCUP00000003308 C2H2 ZF 541 563
ENSOCUP00000003308 C2H2 ZF 569 592
ENSOCUP00000003308 C2H2 ZF 598 620
ENSOCUP00000003308 C2H2 ZF 626 649
ENSOCUP00000003308 C2H2 ZF 655 677
ENSOCUP00000003308 C2H2 ZF 683 706
ENSOCUP00000003308 C2H2 ZF 712 734
ENSOCUP00000003308 C2H2 ZF 740 763
ENSOCUP00000003308 C2H2 ZF 769 792

Links

Other C2H2 ZF family TFs
Other Oryctolagus cuniculus TFs

40 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BRADI3G35280 Brachypodium distachyon BRADI3G35280 N
MLOC_81908 Hordeum vulgare MLOC_81908 N
LPERR08G11550 Leersia perrieri LPERR08G11550 N
OBART08G13930 Oryza barthii OBART08G13930 N
OB08G21740 Oryza brachyantha OB08G21740 N
ORGLA08G0122300 Oryza glaberrima ORGLA08G0122300 N
OGLUM08G14700 Oryza glumaepatula OGLUM08G14700 N
BGIOSGA028630 Oryza indica BGIOSGA028630 N
OLONG_012230 Oryza longistaminata OLONG_012230 N
ONIVA08G14880 Oryza nivara ONIVA08G14880 N
OPUNC08G12580 Oryza punctata OPUNC08G12580 N
OS08G0402100 Oryza sativa OS08G0402100 N
Pavir.Ba02946 Panicum virgatum Pavir.Ba02946 N
Pavir.Fb01201 Panicum virgatum Pavir.Fb01201 N
Pavir.J09527 Panicum virgatum Pavir.J09527 N
Si015783m.g Setaria italica Si015783m.g N
Sb07g019940 Sorghum bicolor Sb07g019940 N
TRAES3BF113300120CFD_g Triticum aestivum TRAES3BF113300120CFD_g N
TRIUR3_30753 Triticum urartu TRIUR3_30753 N
AC217910.3_FG006 Zea mays AC217910.3_FG006 N
GRMZM2G095982 Zea mays GRMZM2G095982 N