ZNF200 (Otolemur garnettii)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSOGAG00000028728 T103731_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF200
M00218_2.00 		Homo sapiens
NRTMTCCNNN
NNNGGAKAYN		 PBM
Barrera et al.(2016)
ZNF200_REF 		0.824 0.983
ZNF200
M08273_2.00 		Homo sapiens
RCTTCCGSBNBV
BVNVSCGGAAGY		 ChIP-seq
Schmitges et al.(2016)
P98182_2-5.RCADE 		0.824 0.983
ZNF200
M08232_2.00 		Homo sapiens
AYTTCC
GGAART		 ChIP-seq
Najafabadi et al.(2015b)
ZNF200 		0.824 0.983
ZNF200
M00217_2.00 		Homo sapiens
NNWCTCAWTWN
NWAWTGAGWNN		 PBM
Barrera et al.(2016)
ZNF200_H322Y 		0.780 0.974
ZNF200
M00219_2.00 		Homo sapiens
NRYHTCCNNN
NNNGGADRYN		 PBM
Barrera et al.(2016)
ZNF200_S265Y 		0.778 0.974
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSOGAP00000017376 C2H2 ZF 252 274
ENSOGAP00000017376 C2H2 ZF 280 302
ENSOGAP00000017376 C2H2 ZF 308 330
ENSOGAP00000017376 C2H2 ZF 336 358
ENSOGAP00000017376 C2H2 ZF 364 386

Links

Other C2H2 ZF family TFs
Other Otolemur garnettii TFs

17 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo9g177030 Brassica oleracea Bo9g177030 N
Bra009123 Brassica rapa Bra009123 N
PK03289.1 Cannabis sativa PK03289.1 N
Ciclev10030684m.g Citrus clementina Ciclev10030684m.g N
GLYMA18G03080 Glycine max GLYMA18G03080 N
LPERR01G03530 Leersia perrieri LPERR01G03530 N
LjT47B05.50.nd Lotus japonicus LjT47B05.50.nd N
MTR_3g070780 Medicago truncatula MTR_3g070780 N
OBART01G03880 Oryza barthii OBART01G03880 N
OB01G13760 Oryza brachyantha OB01G13760 N
ORGLA01G0034200 Oryza glaberrima ORGLA01G0034200 N
OGLUM01G04180 Oryza glumaepatula OGLUM01G04180 N
OLONG_021562 Oryza longistaminata OLONG_021562 N
OMERI01G03770 Oryza meridionalis OMERI01G03770 N
ONIVA01G04320 Oryza nivara ONIVA01G04320 N
OPUNC01G03540 Oryza punctata OPUNC01G03540 N
ORUFI01G03990 Oryza rufipogon ORUFI01G03990 N
OS01G0158900 Oryza sativa OS01G0158900 N
Pavir.J07154 Panicum virgatum Pavir.J07154 N
POPTR_0010s19600 Populus trichocarpa POPTR_0010s19600 N
Si000223m.g Setaria italica Si000223m.g N
Sb03g005310 Sorghum bicolor Sb03g005310 N
GRMZM2G139369 Zea mays GRMZM2G139369 N