CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZNF3
(
Ochotona princeps
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSOPRG00000003308
T104413_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF3
M07613_2.00
Homo sapiens
TCWNTYAKTCADTCA
TGAHTGAMTRANWGA
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF3.RCADE.ReprocessedData
0.825
0.989
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOPRP00000003025
C2H2 ZF
197
219
HKCDECSKSFNRTSDLIQHQRIH
ENSOPRP00000003025
C2H2 ZF
225
247
YECSECGKAFSQSSHLIQHQRIH
ENSOPRP00000003025
C2H2 ZF
253
275
YECNDCGKTFSCSSALILHRRIH
ENSOPRP00000003025
C2H2 ZF
281
303
YECNECGKTFSWSSTLTHHQRIH
ENSOPRP00000003025
C2H2 ZF
309
331
YACNECGKAFSRSSTLIHHQRIH
ENSOPRP00000003025
C2H2 ZF
337
359
YECNECGKAFSQSSHLYQHQRIH
ENSOPRP00000003025
C2H2 ZF
365
387
YECMECGGKFTYSSGLIQHQRIH
ENSOPRP00000003025
C2H2 ZF
393
415
YECSECGKAFRYSSALVRHQRIH
Links
Other
C2H2 ZF
family TFs
Other
Ochotona princeps
TFs
37 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
KAFR_0B03230
Kazachstania africana
KAFR_0B03230
N
KLLA0_C07304g
Kluyveromyces lactis
KLLA0_C07304g
N
KLTH0D12452g
Kluyveromyces thermotolerans
KLTH0D12452g
N
LALA0_S01e04984g
Lachancea lanzarotensis
LALA0_S01e04984g
N
KLTH0D12452g
Lachancea thermotolerans
KLTH0D12452g
N
NCAS_0C01050
Naumovozyma castellii
NCAS_0C01050
N
19101_YMR213W
Saccharomyces bayanus
19101_YMR213W
N
CEF1
Saccharomyces cerevisiae
YMR213W
N
17212_YMR213W
Saccharomyces mikatae
17212_YMR213W
N
TDEL_0B03810
Torulaspora delbrueckii
TDEL_0B03810
N
ZBAI_00661
Zygosaccharomyces bailii
ZBAI_00661
N
ZBAI_05956
Zygosaccharomyces bailii
ZBAI_05956
N
ZYRO0F09526g
Zygosaccharomyces rouxii
ZYRO0F09526g
N