SP6 (Ochotona princeps)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSOPRG00000004019 T104421_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Sp1
M03682_2.00 		Drosophila melanogaster
HNGCCACGCCCARK
MYTGGGCGTGGCND		 SELEX
Nitta et al.(2015)
Sp1_1 		0.785 0.855
Sp1
M06117_2.00 		Drosophila melanogaster
DHYMCGCCCMY
RKGGGCGKRDH		 B1H
Zhu et al.(2011)
Sp1_SANGER_5_FBgn0020378 		0.785 0.855
Sp1
M06118_2.00 		Drosophila melanogaster
NKHHMCGCCCMYNN
NNRKGGGCGKDDMN		 B1H
Zhu et al.(2011)
Sp1_SOLEXA_2.5_FBgn0020378 		0.785 0.855
Sp5
M09016_2.00 		Mus musculus
CYCCKCCYHYHBCYYHBYYYHYHB
VDRDRRRVDRRGVDRDRGGMGGRG		 Misc
Kulakovskiy et al.(2013)
SP5_MOUSE.H11MO.0.C 		0.781 0.826
SP5
M10319_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SP5_Q2 		0.781 0.826
SP8
M02898_2.00 		Homo sapiens
VMCACBCCCMCH
DGKGGGVGTGKB		 SELEX
Jolma et al.(2013)
SP8_1 		0.771 0.841
SP8
M04517_2.00 		Homo sapiens
NMCMCGCCCMYH
DRKGGGCGKGKN		 SELEX
Yin et al.(2017)
SP8_eDBD_HT-SELEX 		0.771 0.841
SP9
M04645_2.00 		Homo sapiens
VMCMCGCCCMYH
DRKGGGCGKGKB		 SELEX
Yin et al.(2017)
SP9_eDBD_HT-SELEX 		0.771 0.841
SP8
M04518_2.00 		Homo sapiens
RHCACGCCCMYH
DRKGGGCGTGDY		 SELEX
Yin et al.(2017)
SP8_eDBD_Methyl-HT-SELEX 		0.771 0.841
SP9
M04646_2.00 		Homo sapiens
RYCACGCCCMYH
DRKGGGCGTGRY		 SELEX
Yin et al.(2017)
SP9_eDBD_Methyl-HT-SELEX 		0.771 0.841
SP3
M02910_2.00 		Homo sapiens
VCCMCRCCCMY
RKGGGYGKGGB		 SELEX
Jolma et al.(2013)
SP3_1 		0.763 0.812
SP3
M04558_2.00 		Homo sapiens
NRCCACGCCCMYH
DRKGGGCGTGGYN		 SELEX
Yin et al.(2017)
SP3_eDBD_HT-SELEX 		0.763 0.812
SP3
M08920_2.00 		Homo sapiens
NBBNVSCCCCKCCCMBBBNN
NNVVVKGGGMGGGGSBNVVN		 Misc
Kulakovskiy et al.(2013)
SP3_HUMAN.H11MO.0.B 		0.763 0.812
SP3
M10263_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SP3_Q3_01 		0.763 0.812
SP3
M10264_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SP3_Q3 		0.763 0.812
SP3
M04559_2.00 		Homo sapiens
NRCCMCGCCCMCH
DGKGGGCGKGGYN		 SELEX
Yin et al.(2017)
SP3_eDBD_Methyl-HT-SELEX 		0.763 0.812
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSOPRP00000003675 C2H2 ZF 254 278
ENSOPRP00000003675 C2H2 ZF 284 308
ENSOPRP00000003675 C2H2 ZF 314 336

Links

Other C2H2 ZF family TFs
Other Ochotona princeps TFs

364 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACYPI067710 Acyrthosiphon pisum ACYPI067710 I 0.000
ENSAMEG00000006908 Ailuropoda melanoleuca ENSAMEG00000006908 I 0.000
Alligator_sinensis_CCG012954.1 Alligator sinensis Alligator_sinensis_CCG012954.1 I 0.000
ENSAPLG00000004928 Anas platyrhynchos ENSAPLG00000004928 I 0.000
PAX6 Anolis carolinensis ENSACAG00000002252 I 0.000
GB50342 Apis mellifera GB50342 I 0.000
Afo_R014630 Aptenodytes forsteri Afo_R014630 I 0.000
ENSAMXG00000001228 Astyanax mexicanus ENSAMXG00000001228 I 0.000
ENSAMXG00000013008 Astyanax mexicanus ENSAMXG00000013008 I 0.000
ENSP00000368401-D1 Bos grunniens ENSP00000368401-D1 I 0.000
PAX6 Bos taurus ENSBTAG00000004561 I 0.000
fgenesh2_pg.scaffold_199000043 Branchiostoma floridae fgenesh2_pg.scaffold_199000043 I 0.000
fgenesh2_pg.scaffold_23000118 Branchiostoma floridae fgenesh2_pg.scaffold_23000118 I 0.000
PAX6 Callithrix jacchus ENSCJAG00000005942 I 0.000
PAX6 Cavia porcellus ENSCPOG00000007245 I 0.000
Cmyd_10016391 Chelonia mydas Cmyd_10016391 I 0.000
ENSCSAG00000005253 Chlorocebus sabaeus ENSCSAG00000005253 I 0.000
ENSCING00000006503 Ciona intestinalis ENSCING00000006503 I 0.000
ENSCSAVG00000007987 Ciona savignyi ENSCSAVG00000007987 I 0.000
CpipJ_CPIJ006390 Culex pipiens CpipJ_CPIJ006390 I 0.000
CPIJ006390 Culex quinquefasciatus CPIJ006390 I 0.000
pax6b Danio rerio ENSDARG00000045936 I 0.000
pax6a Danio rerio ENSDARG00000103379 I 0.000
PAX6 Dasypus novemcinctus ENSDNOG00000000761 I 0.000
GF22818 Drosophila ananassae FBgn0099812 I 0.000
GG16399 Drosophila erecta FBgn0108631 I 0.000
ey Drosophila melanogaster FBgn0005558 D 0.000
GI14081 Drosophila mojavensis FBgn0136835 I 0.000
ey Drosophila persimilis FBgn0043659 I 0.000
ey Drosophila pseudoobscura FBgn0018538 I 0.000
ey Drosophila sechellia FBgn0068720 I 0.000
ey Drosophila virilis FBgn0028754 I 0.000
GK13702 Drosophila willistoni FBgn0215710 I 0.000
GE14559 Drosophila yakuba FBgn0232158 I 0.000
PAX6 Echinops telfairi ENSETEG00000002655 I 0.000
PAX6 Equus caballus ENSECAG00000021000 I 0.000
PAX6 Felis catus ENSFCAG00000007094 I 0.000
ENSFALG00000010839 Ficedula albicollis ENSFALG00000010839 I 0.000
ENSGMOG00000012304 Gadus morhua ENSGMOG00000012304 I 0.000
ENSGMOG00000019087 Gadus morhua ENSGMOG00000019087 I 0.000
PAX6 Gallus gallus ENSGALG00000012123 I 0.000
ENSGACG00000002490 Gasterosteus aculeatus ENSGACG00000002490 I 0.000
pax6b Gasterosteus aculeatus ENSGACG00000016030 I 0.000
Gfo_R001537 Geospiza fortis Gfo_R001537 I 0.000
PAX6 Gorilla gorilla ENSGGOG00000010246 I 0.000
Hsal_03768--XP_394294.2_APIME Harpegnathos saltator Hsal_03768--XP_394294.2_APIME I 0.000
PAX6 Homo sapiens ENSG00000007372 D 0.000
ENSSTOG00000003211 Ictidomys tridecemlineatus ENSSTOG00000003211 I 0.000
ENSLACG00000015337 Latimeria chalumnae ENSLACG00000015337 I 0.000
ENSLOCG00000004578 Lepisosteus oculatus ENSLOCG00000004578 I 0.000
PAX6 Loxodonta africana ENSLAFG00000015520 I 0.000
ENSP00000368424 Macaca fascicularis ENSP00000368424 I 0.000
PAX6 Macaca mulatta ENSMMUG00000016810 I 0.000
PAX6 Microcebus murinus ENSMICG00000004089 I 0.000
PAX6 Monodelphis domestica ENSMODG00000009611 I 0.000
ENSMPUG00000011295 Mustela putorius furo ENSMPUG00000011295 I 0.000
Pax6 Mus musculus ENSMUSG00000027168 D 0.000
PAX6 Myotis lucifugus ENSMLUG00000006517 I 0.000
NV15820 Nasonia vitripennis NV15820 I 0.000
ENSNLEG00000017888 Nomascus leucogenys ENSNLEG00000017888 I 0.000
PAX6 Ochotona princeps ENSOPRG00000001678 I 0.000
Ogr12767 Ophisaurus gracilis Ogr12767 I 0.000
ENSONIG00000004074 Oreochromis niloticus ENSONIG00000004074 I 0.000
ENSONIG00000005541 Oreochromis niloticus ENSONIG00000005541 I 0.000
PAX6 Ornithorhynchus anatinus ENSOANG00000015149 I 0.000
PAX6 Oryctolagus cuniculus ENSOCUG00000011075 I 0.000
ENSORLG00000000847 Oryzias latipes ENSORLG00000000847 I 0.000
pax6b Oryzias latipes ENSORLG00000009913 I 0.000
PAX6 Otolemur garnettii ENSOGAG00000007857 I 0.000
ENSOARG00000016191 Ovis aries ENSOARG00000016191 I 0.000
PAX6 Pan troglodytes ENSPTRG00000003474 I 0.000
ENSPANG00000005448 Papio anubis ENSPANG00000005448 I 0.000
ENSPSIG00000012748 Pelodiscus sinensis ENSPSIG00000012748 I 0.000
ENSPFOG00000016987 Poecilia formosa ENSPFOG00000016987 I 0.000
Pvit_09512 Pogona vitticeps Pvit_09512 I 0.000
ENSPPYG00000003386 Pongo abelii ENSPPYG00000003386 I 0.000
PAX6 Procavia capensis ENSPCAG00000005165 I 0.000
Pax6 Rattus norvegicus ENSRNOG00000004410 I 0.000
Sakowv30011253m.g Saccoglossus kowalevskii Sakowv30011253m.g I 0.000
Sakowv30026828m.g Saccoglossus kowalevskii Sakowv30026828m.g I 0.000
ENSSHAG00000016310 Sarcophilus harrisii ENSSHAG00000016310 I 0.000
SINV20456 Solenopsis invicta SINV20456 I 0.000
PAX6 Sorex araneus ENSSARG00000011424 I 0.000
SMAR013763 Strigamia maritima SMAR013763 I 0.000
PAX6 Sus scrofa ENSSSCG00000013320 I 0.000
pax6b Takifugu rubripes ENSTRUG00000006935 I 0.000
ENSTRUG00000017375 Takifugu rubripes ENSTRUG00000017375 I 0.000
ENSTSYG00000011965 Tarsius syrichta ENSTSYG00000011965 I 0.000
ENSTNIG00000002471 Tetraodon nigroviridis ENSTNIG00000002471 I 0.000
pax6b Tetraodon nigroviridis ENSTNIG00000013804 I 0.000
TC008176 Tribolium castaneum TC008176 I 0.000
TTRE_0000173501 Trichuris trichiura TTRE_0000173501 I 0.000
PAX6 Tupaia belangeri ENSTBEG00000004748 I 0.000
PAX6 Tursiops truncatus ENSTTRG00000002399 I 0.000
pax6.S Xenopus laevis XB-GENE-6464331 I 0.000
pax6.L Xenopus laevis XB-GENE-865046 I 0.000
pax6 Xenopus tropicalis XB-GENE-484088 I 0.000
ENSXMAG00000014260 Xiphophorus maculatus ENSXMAG00000014260 I 0.000
ENSXMAG00000016421 Xiphophorus maculatus ENSXMAG00000016421 I 0.000
L798_00712 Zootermopsis nevadensis L798_00712 I 0.000
L798_11483 Zootermopsis nevadensis L798_11483 I 0.000