GLI1 (Ochotona princeps)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSOPRG00000006483 T104475_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Gli1
M01023_2.00 		Mus musculus
NGACCACCHN
NDGGTGGTCN		 PBM
Peterson et al.(2012)
Gli1 		0.827 1.000
GLI1
M02643_2.00 		Homo sapiens
GACCACCCAMG
CKTGGGTGGTC		 SELEX
Hallikas et al.(2006)
GLI1 		0.827 1.000
Gli1
M08976_2.00 		Mus musculus
RGRCCACCCASV
BSTGGGTGGYCY		 Misc
Kulakovskiy et al.(2013)
GLI1_MOUSE.H11MO.0.C 		0.827 1.000
GLI1
M10176_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI1_Q2 		0.827 1.000
GLI1
M10177_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI1_Q3_01 		0.827 1.000
GLI1
M10178_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI1_Q3 		0.827 1.000
GLI1
M10179_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI_Q6 		0.827 1.000
GLI3
M04416_2.00 		Homo sapiens
VGACCACCCACVNHG
CDNBGTGGGTGGTCB		 SELEX
Yin et al.(2017)
GLI3_eDBD_HT-SELEX 		0.796 0.886
GLI3
M02642_2.00 		Homo sapiens
GACCACCCANK
MNTGGGTGGTC		 SELEX
Hallikas et al.(2006)
GLI3 		0.796 0.886
GLI3
M08875_2.00 		Homo sapiens
VRACCACCCAV
BTGGGTGGTYB		 Misc
Kulakovskiy et al.(2013)
GLI3_HUMAN.H11MO.0.B 		0.796 0.886
GLI3
M10167_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI3_01 		0.796 0.886
GLI3
M10168_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI3_Q5_01 		0.796 0.886
GLI3
M04417_2.00 		Homo sapiens
CWHBGTGGGTGGTCY
RGACCACCCACVDWG		 SELEX
Yin et al.(2017)
GLI3_eDBD_Methyl-HT-SELEX 		0.796 0.886
Gli2
M01024_2.00 		Mus musculus
NGACCACCYN
NRGGTGGTCN		 PBM
Peterson et al.(2012)
Gli2 		0.779 0.851
GLI2
M02875_2.00 		Homo sapiens
GMCCACMCANVNHB
VDNBNTGKGTGGKC		 SELEX
Jolma et al.(2013)
GLI2_1 		0.779 0.851
GLI2
M02876_2.00 		Homo sapiens
GCGACCACVCWR
YWGBGTGGTCGC		 SELEX
Jolma et al.(2013)
GLI2_2 		0.779 0.851
GLI2
M02732_2.00 		Homo sapiens
GACCACMCAN
NTGKGTGGTC		 SELEX
Jolma et al.(2010)
GLI2_monomer 		0.779 0.851
GLI2
M04402_2.00 		Homo sapiens
VGACCACCCACVDHG
CDHBGTGGGTGGTCB		 SELEX
Yin et al.(2017)
GLI2_eDBD_HT-SELEX 		0.779 0.851
GLI2
M02641_2.00 		Homo sapiens
GACCACCCAHG
CDTGGGTGGTC		 SELEX
Hallikas et al.(2006)
GLI2 		0.779 0.851
GLI2
M10114_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI2_Q3 		0.779 0.851
GLI2
M10115_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI2_Q6 		0.779 0.851
GLI2
M04403_2.00 		Homo sapiens
RGACCACCCACVWWG
CWWBGTGGGTGGTCY		 SELEX
Yin et al.(2017)
GLI2_eDBD_Methyl-HT-SELEX 		0.779 0.851
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSOPRP00000005946 C2H2 ZF 237 261
ENSOPRP00000005946 C2H2 ZF 269 296
ENSOPRP00000005946 C2H2 ZF 302 326
ENSOPRP00000005946 C2H2 ZF 332 357
ENSOPRP00000005946 C2H2 ZF 363 388

Links

Other C2H2 ZF family TFs
Other Ochotona princeps TFs

163 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_047_00006 Aquilegia coerulea Aquca_047_00006 I 0.000
ATMYB90 Arabidopsis lyrata scaffold_201358.1 I 0.000
scaffold_201357.1 Arabidopsis lyrata scaffold_201357.1 I 0.000
MYB113 Arabidopsis lyrata fgenesh2_kg.2__869__AT1G66370.1 I 0.000
PAP1 Arabidopsis lyrata fgenesh2_kg.1__4777__AT1G56650.1 I 0.000
MYB113 Arabidopsis thaliana AT1G66370 D 0.000
MYB75 Arabidopsis thaliana AT1G56650 I 0.000
MYB90 Arabidopsis thaliana AT1G66390 I 0.000
MYB114 Arabidopsis thaliana AT1G66380 I 0.000
Bostr.26959s0279 Boechera stricta Bostr.26959s0279 I 0.000
Bo6g100940 Brassica oleracea Bo6g100940 I 0.000
Bo6g099880 Brassica oleracea Bo6g099880 I 0.000
Bo00835s060 Brassica oleracea Bo00835s060 I 0.000
Bra001917 Brassica rapa Bra001917 I 0.000
Bra004162 Brassica rapa Bra004162 I 0.000
Bra039763 Brassica rapa Bra039763 I 0.000
PK05760.1 Cannabis sativa PK05760.1 I 0.000
PK17827.1 Cannabis sativa PK17827.1 I 0.000
Cagra.0463s0006 Capsella grandiflora Cagra.0463s0006 I 0.000
Cagra.2629s0007 Capsella grandiflora Cagra.2629s0007 I 0.000
Cagra.2400s0001 Capsella grandiflora Cagra.2400s0001 I 0.000
Cagra.0463s0008 Capsella grandiflora Cagra.0463s0008 I 0.000
Cagra.0463s0007 Capsella grandiflora Cagra.0463s0007 I 0.000
Carubv10020856m.g Capsella rubella Carubv10020856m.g I 0.000
Carubv10020888m.g Capsella rubella Carubv10020888m.g I 0.000
evm.TU.supercontig_116.38 Carica papaya evm.TU.supercontig_116.38 I 0.000
evm.TU.supercontig_2742.1 Carica papaya evm.TU.supercontig_2742.1 I 0.000
evm.TU.supercontig_51.67 Carica papaya evm.TU.supercontig_51.67 I 0.000
Ca_19630 Cicer arietinum Ca_19630 I 0.000
Ca_22078 Cicer arietinum Ca_22078 I 0.000
Ciclev10013455m.g Citrus clementina Ciclev10013455m.g I 0.000
Eucgr.F02842 Eucalyptus grandis Eucgr.F02842 I 0.000
Eucgr.H04157 Eucalyptus grandis Eucgr.H04157 I 0.000
Thhalv10019041m.g Eutrema salsugineum Thhalv10019041m.g I 0.000
gene31413-v1.0-hybrid Fragaria vesca gene31413-v1.0-hybrid I 0.000
GLYMA07G16980 Glycine max GLYMA07G16980 I 0.000
GLYMA09G36966 Glycine max GLYMA09G36966 I 0.000
GLYMA19G02980 Glycine max GLYMA19G02980 I 0.000
GLYMA18G49690 Glycine max GLYMA18G49690 I 0.000
GLYMA18G49670 Glycine max GLYMA18G49670 I 0.000
GLYMA18G41520 Glycine max GLYMA18G41520 I 0.000
GLYMA09G37010 Glycine max GLYMA09G37010 I 0.000
GLYMA09G36983 Glycine max GLYMA09G36983 I 0.000
Gorai.013G118300 Gossypium raimondii Gorai.013G118300 I 0.000
Gorai.007G268800 Gossypium raimondii Gorai.007G268800 I 0.000
Gorai.001G087400 Gossypium raimondii Gorai.001G087400 I 0.000
Gorai.001G087200 Gossypium raimondii Gorai.001G087200 I 0.000
Lus10042522.g Linum usitatissimum Lus10042522.g I 0.000
Lus10028513.g Linum usitatissimum Lus10028513.g I 0.000
Lus10009130.g Linum usitatissimum Lus10009130.g I 0.000
chr1.CM0141.350.nd Lotus japonicus chr1.CM0141.350.nd I 0.000
MDP0000478453 Malus domestica MDP0000478453 I 0.000
MDP0000192051 Malus domestica MDP0000192051 I 0.000
MTR_0001s0360 Medicago truncatula MTR_0001s0360 I 0.000
MTR_0197s0010 Medicago truncatula MTR_0197s0010 I 0.000
MTR_5g078800 Medicago truncatula MTR_5g078800 I 0.000
MTR_5g078860 Medicago truncatula MTR_5g078860 I 0.000
MTR_5g078910 Medicago truncatula MTR_5g078910 I 0.000
MTR_5g078950 Medicago truncatula MTR_5g078950 I 0.000
MTR_5g079120 Medicago truncatula MTR_5g079120 I 0.000
MTR_5g079220 Medicago truncatula MTR_5g079220 I 0.000
MTR_5g079290 Medicago truncatula MTR_5g079290 I 0.000
MTR_7g017260 Medicago truncatula MTR_7g017260 I 0.000
MTR_8g060940 Medicago truncatula MTR_8g060940 I 0.000
mgf019317m Mimulus guttatus mgf019317m I 0.000
Pm025429 Prunus mume Pm025429 I 0.000
Pm029440 Prunus mume Pm029440 I 0.000
Pm029442 Prunus mume Pm029442 I 0.000
Pm029445 Prunus mume Pm029445 I 0.000
Pm031337 Prunus mume Pm031337 I 0.000
PRUPE_ppa026640mg Prunus persica PRUPE_ppa026640mg I 0.000
PRUPE_ppa016711mg Prunus persica PRUPE_ppa016711mg I 0.000
PRUPE_ppa010069mg Prunus persica PRUPE_ppa010069mg I 0.000
27763.m000042 Ricinus communis 27763.m000042 I 0.000
Solyc10g086290.1 Solanum lycopersicum Solyc10g086290.1 I 0.000
Solyc10g086270.1 Solanum lycopersicum Solyc10g086270.1 I 0.000
Solyc10g086260.1 Solanum lycopersicum Solyc10g086260.1 I 0.000
Solyc10g086250.1 Solanum lycopersicum Solyc10g086250.1 I 0.000
TCM_019192 Theobroma cacao TCM_019192 I 0.000
TCM_026054 Theobroma cacao TCM_026054 I 0.000
VIT_14s0006g01340 Vitis vinifera VIT_14s0006g01340 I 0.000
VIT_14s0006g01290 Vitis vinifera VIT_14s0006g01290 I 0.000
VIT_14s0006g01280 Vitis vinifera VIT_14s0006g01280 I 0.000
VIT_02s0033g00450 Vitis vinifera VIT_02s0033g00450 I 0.000
VIT_02s0033g00430 Vitis vinifera VIT_02s0033g00430 I 0.000
VIT_02s0033g00410 Vitis vinifera VIT_02s0033g00410 I 0.000
VIT_02s0033g00400 Vitis vinifera VIT_02s0033g00400 I 0.000
VIT_02s0033g00390 Vitis vinifera VIT_02s0033g00390 I 0.000