ENSPPYG00000004689 (Pongo abelii)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSPPYG00000004689 T106803_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Gli1
M01023_2.00 		Mus musculus
NGACCACCHN
NDGGTGGTCN		 PBM
Peterson et al.(2012)
Gli1 		0.827 1.000
GLI1
M02643_2.00 		Homo sapiens
GACCACCCAMG
CKTGGGTGGTC		 SELEX
Hallikas et al.(2006)
GLI1 		0.827 1.000
Gli1
M08976_2.00 		Mus musculus
RGRCCACCCASV
BSTGGGTGGYCY		 Misc
Kulakovskiy et al.(2013)
GLI1_MOUSE.H11MO.0.C 		0.827 1.000
GLI1
M10176_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI1_Q2 		0.827 1.000
GLI1
M10177_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI1_Q3_01 		0.827 1.000
GLI1
M10178_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI1_Q3 		0.827 1.000
GLI1
M10179_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI_Q6 		0.827 1.000
GLI3
M04416_2.00 		Homo sapiens
VGACCACCCACVNHG
CDNBGTGGGTGGTCB		 SELEX
Yin et al.(2017)
GLI3_eDBD_HT-SELEX 		0.796 0.886
GLI3
M02642_2.00 		Homo sapiens
GACCACCCANK
MNTGGGTGGTC		 SELEX
Hallikas et al.(2006)
GLI3 		0.796 0.886
GLI3
M08875_2.00 		Homo sapiens
VRACCACCCAV
BTGGGTGGTYB		 Misc
Kulakovskiy et al.(2013)
GLI3_HUMAN.H11MO.0.B 		0.796 0.886
GLI3
M10167_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI3_01 		0.796 0.886
GLI3
M10168_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI3_Q5_01 		0.796 0.886
GLI3
M04417_2.00 		Homo sapiens
CWHBGTGGGTGGTCY
RGACCACCCACVDWG		 SELEX
Yin et al.(2017)
GLI3_eDBD_Methyl-HT-SELEX 		0.796 0.886
Gli2
M01024_2.00 		Mus musculus
NGACCACCYN
NRGGTGGTCN		 PBM
Peterson et al.(2012)
Gli2 		0.779 0.851
GLI2
M02875_2.00 		Homo sapiens
GMCCACMCANVNHB
VDNBNTGKGTGGKC		 SELEX
Jolma et al.(2013)
GLI2_1 		0.779 0.851
GLI2
M02876_2.00 		Homo sapiens
GCGACCACVCWR
YWGBGTGGTCGC		 SELEX
Jolma et al.(2013)
GLI2_2 		0.779 0.851
GLI2
M02732_2.00 		Homo sapiens
GACCACMCAN
NTGKGTGGTC		 SELEX
Jolma et al.(2010)
GLI2_monomer 		0.779 0.851
GLI2
M04402_2.00 		Homo sapiens
VGACCACCCACVDHG
CDHBGTGGGTGGTCB		 SELEX
Yin et al.(2017)
GLI2_eDBD_HT-SELEX 		0.779 0.851
GLI2
M02641_2.00 		Homo sapiens
GACCACCCAHG
CDTGGGTGGTC		 SELEX
Hallikas et al.(2006)
GLI2 		0.779 0.851
GLI2
M10114_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI2_Q3 		0.779 0.851
GLI2
M10115_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI2_Q6 		0.779 0.851
GLI2
M04403_2.00 		Homo sapiens
RGACCACCCACVWWG
CWWBGTGGGTGGTCY		 SELEX
Yin et al.(2017)
GLI2_eDBD_Methyl-HT-SELEX 		0.779 0.851
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPPYP00000005342 C2H2 ZF 236 260
ENSPPYP00000005342 C2H2 ZF 268 295
ENSPPYP00000005342 C2H2 ZF 301 325
ENSPPYP00000005342 C2H2 ZF 331 356
ENSPPYP00000005342 C2H2 ZF 362 387

Links

Other C2H2 ZF family TFs
Other Pongo abelii TFs

163 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00149p00035260 Amborella trichopoda AMTR_s00149p00035260 I 0.000
Aquca_044_00072 Aquilegia coerulea Aquca_044_00072 I 0.000
APRR2 Arabidopsis lyrata fgenesh2_kg.7__2503__AT4G18020.2 I 0.000
APRR2 Arabidopsis thaliana AT4G18020 D 0.000
Bostr.30275s0270 Boechera stricta Bostr.30275s0270 I 0.000
Bo1g019180 Brassica oleracea Bo1g019180 I 0.000
Bo7g105690 Brassica oleracea Bo7g105690 I 0.000
Bra012623 Brassica rapa Bra012623 I 0.000
Bra013277 Brassica rapa Bra013277 I 0.000
Bra013278 Brassica rapa Bra013278 I 0.000
Bra013279 Brassica rapa Bra013279 I 0.000
PK19826.1 Cannabis sativa PK19826.1 I 0.000
Cagra.1595s0002 Capsella grandiflora Cagra.1595s0002 I 0.000
Carubv10004540m.g Capsella rubella Carubv10004540m.g I 0.000
evm.TU.supercontig_6.428 Carica papaya evm.TU.supercontig_6.428 I 0.000
Ca_24009 Cicer arietinum Ca_24009 I 0.000
Ca_12825 Cicer arietinum Ca_12825 I 0.000
Ca_02285 Cicer arietinum Ca_02285 I 0.000
Cla016403 Citrullus lanatus Cla016403 I 0.000
Cla008926 Citrullus lanatus Cla008926 I 0.000
Ciclev10031120m.g Citrus clementina Ciclev10031120m.g I 0.000
orange1.1g008254m.g Citrus sinensis orange1.1g008254m.g I 0.000
Cucsa.313480 Cucumis sativus Cucsa.313480 I 0.000
Cucsa.321580 Cucumis sativus Cucsa.321580 I 0.000
Eucgr.E00308 Eucalyptus grandis Eucgr.E00308 I 0.000
Thhalv10024919m.g Eutrema salsugineum Thhalv10024919m.g I 0.000
gene10484-v1.0-hybrid Fragaria vesca gene10484-v1.0-hybrid I 0.000
GLYMA01G40900 Glycine max GLYMA01G40900 I 0.000
GLYMA05G06070 Glycine max GLYMA05G06070 I 0.000
GLYMA17G16360 Glycine max GLYMA17G16360 I 0.000
GLYMA11G04441 Glycine max GLYMA11G04441 I 0.000
Gorai.004G188300 Gossypium raimondii Gorai.004G188300 I 0.000
Gorai.008G228800 Gossypium raimondii Gorai.008G228800 I 0.000
Gorai.003G180100 Gossypium raimondii Gorai.003G180100 I 0.000
Lus10003013.g Linum usitatissimum Lus10003013.g I 0.000
Lus10011044.g Linum usitatissimum Lus10011044.g I 0.000
Lus10040109.g Linum usitatissimum Lus10040109.g I 0.000
chr4.CM0831.100.nd Lotus japonicus chr4.CM0831.100.nd I 0.000
chr2.CM0021.770.nc Lotus japonicus chr2.CM0021.770.nc I 0.000
MDP0000237396 Malus domestica MDP0000237396 I 0.000
MDP0000248863 Malus domestica MDP0000248863 I 0.000
cassava42048.valid.m1 Manihot esculenta cassava42048.valid.m1 I 0.000
cassava42047.valid.m1 Manihot esculenta cassava42047.valid.m1 I 0.000
cassava2466.valid.m1 Manihot esculenta cassava2466.valid.m1 I 0.000
MTR_4g098870 Medicago truncatula MTR_4g098870 I 0.000
MTR_5g014040 Medicago truncatula MTR_5g014040 I 0.000
GSMUA_Achr2G15250_001 Musa acuminata GSMUA_Achr2G15250_001 I 0.000
GSMUA_Achr11G17740_001 Musa acuminata GSMUA_Achr11G17740_001 I 0.000
GSMUA_Achr2G18200_001 Musa acuminata GSMUA_Achr2G18200_001 I 0.000
PDK_20s1585631g001 Phoenix dactylifera PDK_20s1585631g001 I 0.000
POPTR_0003s08600 Populus trichocarpa POPTR_0003s08600 I 0.000
POPTR_0001s02910 Populus trichocarpa POPTR_0001s02910 I 0.000
Pm014733 Prunus mume Pm014733 I 0.000
PRUPE_ppa004161mg Prunus persica PRUPE_ppa004161mg I 0.000
30054.m000786 Ricinus communis 30054.m000786 I 0.000
SapurV1A.0132s0010 Salix purpurea SapurV1A.0132s0010 I 0.000
SapurV1A.1296s0050 Salix purpurea SapurV1A.1296s0050 I 0.000
SELMODRAFT_428906 Selaginella moellendorffii SELMODRAFT_428906 I 0.000
Solyc08g077230.2 Solanum lycopersicum Solyc08g077230.2 I 0.000
Solyc06g061030.2 Solanum lycopersicum Solyc06g061030.2 I 0.000
PGSC0003DMG400024217 Solanum tuberosum PGSC0003DMG400024217 I 0.000
PGSC0003DMG400026587 Solanum tuberosum PGSC0003DMG400026587 I 0.000
TCM_015780 Theobroma cacao TCM_015780 I 0.000
APRR2 Vitis vinifera VIT_02s0012g00570 I 0.000