CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLI4
(
Pan troglodytes
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSPTRG00000020650
T108204_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
GLI4
M08394_2.00
Homo sapiens
TKRNCNTGGCATTCAAGGCYY
RRGCCTTGAATGCCANGNYMA
ChIP-seq
Schmitges et al.(2016)
P10075.MEME
0.826
0.994
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPTRP00000035310
C2H2 ZF
183
205
HRCEACGKSFKYNSLLLKHQRIH
ENSPTRP00000035310
C2H2 ZF
211
233
YACHECGKRFRGWSGFIQHHRIH
ENSPTRP00000035310
C2H2 ZF
239
261
YECGQCGRAFSHSSHFTQHLRIH
ENSPTRP00000035310
C2H2 ZF
267
289
YKCGECGQAFSQSSNLVRHQRLH
ENSPTRP00000035310
C2H2 ZF
295
317
YACSQCGKAFIWSSVLIEHQRIH
ENSPTRP00000035310
C2H2 ZF
323
345
YECADCGKAFRGRSHFFRHLRTH
ENSPTRP00000035310
C2H2 ZF
351
373
FACGACGKAFGQSSQLIQHQRVH
Links
Other
C2H2 ZF
family TFs
Other
Pan troglodytes
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACRE_017350
Acremonium chrysogenum
ACRE_017350
I
BGHDH14_bgh03623
Blumeria graminis
BGHDH14_bgh03623
N
Bcin03g03310
Botrytis cinerea
Bcin03g03310
N
CPUR_01075
Claviceps purpurea
CPUR_01075
I
CFIO01_12739
Colletotrichum fioriniae
CFIO01_12739
I
GLRG_03163
Colletotrichum graminicola
GLRG_03163
I
CH063_14002
Colletotrichum higginsianum
CH063_14002
I
CSUB01_04359
Colletotrichum sublineola
CSUB01_04359
I
UCREL1_6424
Eutypa lata
UCREL1_6424
I
FOXG_01644
Fusarium oxysporum
FOXG_01644
I
NechaG84694
Fusarium solani
NechaG84694
I
GGTG_00579
Gaeumannomyces graminis
GGTG_00579
I
MAPG_07299
Magnaporthe poae
MAPG_07299
I
fgenesh1_pg.sca_6_chr9_2_0000157
Nectria haematococca
fgenesh1_pg.sca_6_chr9_2_0000157
I
OIDMADRAFT_133160
Oidiodendron maius
OIDMADRAFT_133160
N
SBOR_5922
Sclerotinia borealis
SBOR_5922
N
VDBG_04231
Verticillium albo atrum
VDBG_04231
I
VDBG_04231
Verticillium alfalfae
VDBG_04231
I