CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Znf48
(
Rattus norvegicus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSRNOG00000017837
T109054_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSRNOP00000023995
C2H2 ZF
84
105
VCGECGKSFRQMSDLVKHQRTH
ENSRNOP00000023995
C2H2 ZF
111
133
YKCGVCGKGFGDSSARIKHQRTH
ENSRNOP00000023995
C2H2 ZF
163
185
TICGECGKSFRQSSDLVKHQRTH
ENSRNOP00000023995
C2H2 ZF
191
213
YKCGICGKGFGDSSARIKHQRTH
ENSRNOP00000023995
C2H2 ZF
246
268
YICTDCGKRFVLSCSLLSHQRSH
ENSRNOP00000023995
C2H2 ZF
274
296
FGCDVCGKEFARGSDLVKHLRVH
ENSRNOP00000023995
C2H2 ZF
302
324
YLCPECGKGFADSSARVKHLRTH
ENSRNOP00000023995
C2H2 ZF
330
352
HACPECNRSFSLSSTLLRHRLTH
ENSRNOP00000023995
C2H2 ZF
423
445
HKCPECGKGFRRSSDLVKHHRVH
ENSRNOP00000023995
C2H2 ZF
451
473
YLCPECGKGFADSSARVKHLRTH
ENSRNOP00000023995
C2H2 ZF
515
537
HVCGFCGKEFPRSSDLVKHRRTH
ENSRNOP00000023995
C2H2 ZF
543
565
YKCAECGKGFGDSSARIKHQRGH
Links
Other
C2H2 ZF
family TFs
Other
Rattus norvegicus
TFs
24 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMEG00000007562
Ailuropoda melanoleuca
ENSAMEG00000007562
N
ENSAPLG00000012018
Anas platyrhynchos
ENSAPLG00000012018
N
ENSP00000291374-D1
Bos grunniens
ENSP00000291374-D1
N
Brh_R010385
Buceros rhinoceros
Brh_R010385
N
ENSCAFG00000023754
Canis familiaris
ENSCAFG00000023754
N
ENSCPOG00000003956
Cavia porcellus
ENSCPOG00000003956
N
Cmyd_10005415
Chelonia mydas
Cmyd_10005415
N
ENSCSAG00000001057
Chlorocebus sabaeus
ENSCSAG00000001057
N
ENSCHOG00000004264
Choloepus hoffmanni
ENSCHOG00000004264
N
ENSDNOG00000002252
Dasypus novemcinctus
ENSDNOG00000002252
N
ENSETEG00000001618
Echinops telfairi
ENSETEG00000001618
N
ENSECAG00000008368
Equus caballus
ENSECAG00000008368
N
ENSEEUG00000015979
Erinaceus europaeus
ENSEEUG00000015979
N
ENSFCAG00000000744
Felis catus
ENSFCAG00000000744
N
ENSFALG00000000604
Ficedula albicollis
ENSFALG00000000604
N
Gfo_R011647
Geospiza fortis
Gfo_R011647
N
ENSGGOG00000026784
Gorilla gorilla
ENSGGOG00000026784
N
ZBTB8B
Homo sapiens
ENSG00000273274
N
ENSSTOG00000027615
Ictidomys tridecemlineatus
ENSSTOG00000027615
N
ENSLACG00000016238
Latimeria chalumnae
ENSLACG00000016238
N
ENSLOCG00000000323
Lepisosteus oculatus
ENSLOCG00000000323
N
ENSLAFG00000023212
Loxodonta africana
ENSLAFG00000023212
N
ENSP00000291374
Macaca fascicularis
ENSP00000291374
N
ENSMMUG00000019801
Macaca mulatta
ENSMMUG00000019801
N
ENSMGAG00000004943
Meleagris gallopavo
ENSMGAG00000004943
N
ENSMODG00000017428
Monodelphis domestica
ENSMODG00000017428
N
ENSMPUG00000015225
Mustela putorius furo
ENSMPUG00000015225
N
Zbtb8b
Mus musculus
ENSMUSG00000048485
N
Myotis_brandtii_ZBTB8B_10012392
Myotis brandtii
Myotis_brandtii_ZBTB8B_10012392
N
ENSMLUG00000000818
Myotis lucifugus
ENSMLUG00000000818
N
ENSOPRG00000000880
Ochotona princeps
ENSOPRG00000000880
N
Ogr05993
Ophisaurus gracilis
Ogr05993
N
ENSOANG00000001192
Ornithorhynchus anatinus
ENSOANG00000001192
N
ENSOCUG00000011975
Oryctolagus cuniculus
ENSOCUG00000011975
N
ENSOGAG00000013012
Otolemur garnettii
ENSOGAG00000013012
N
ENSOARG00000020934
Ovis aries
ENSOARG00000020934
N
ENSPTRG00000000485
Pan troglodytes
ENSPTRG00000000485
N
ENSPANG00000016510
Papio anubis
ENSPANG00000016510
N
Pvit_17719
Pogona vitticeps
Pvit_17719
N
ENSPPYG00000001591
Pongo abelii
ENSPPYG00000001591
N
ENSPCAG00000013117
Procavia capensis
ENSPCAG00000013117
N
Zbtb8b
Rattus norvegicus
ENSRNOG00000026898
N
ENSSARG00000013492
Sorex araneus
ENSSARG00000013492
N
ENSSSCG00000022120
Sus scrofa
ENSSSCG00000022120
N
ENSTGUG00000001374
Taeniopygia guttata
ENSTGUG00000001374
N
ENSTSYG00000007928
Tarsius syrichta
ENSTSYG00000007928
N
ENSTTRG00000003694
Tursiops truncatus
ENSTTRG00000003694
N
zbtb8b.S
Xenopus laevis
XB-GENE-5788447
N
zbtb8b
Xenopus tropicalis
XB-GENE-5788421
N