Sall4 (Rattus norvegicus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSRNOG00000050035 T109297_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SALL4
M08866_2.00 		Homo sapiens
CMCWCCCHNN
NNDGGGWGKG		 Misc
Kulakovskiy et al.(2013)
SALL4_HUMAN.H11MO.0.B 		0.816 0.957
Sall4
M08979_2.00 		Mus musculus
CMCWCCCHNN
NNDGGGWGKG		 Misc
Kulakovskiy et al.(2013)
SALL4_MOUSE.H11MO.0.A 		0.814 0.957
Sall4
M10341_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DRRS_05 		0.814 0.957
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000066945 C2H2 ZF 91 113
ENSRNOP00000066945 C2H2 ZF 119 141
ENSRNOP00000067726 C2H2 ZF 385 407
ENSRNOP00000067726 C2H2 ZF 413 435
ENSRNOP00000067726 C2H2 ZF 600 622
ENSRNOP00000067726 C2H2 ZF 632 654
ENSRNOP00000067726 C2H2 ZF 879 901
ENSRNOP00000067726 C2H2 ZF 907 929

Links

Other C2H2 ZF family TFs
Other Rattus norvegicus TFs

34 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL003978 Aedes aegypti AAEL003978 I
AALB005349 Anopheles albimanus AALB005349 I
AATE004981 Anopheles atroparvus AATE004981 I
ACOM027947 Anopheles coluzzii ACOM027947 I
ACUA018690 Anopheles culicifacies ACUA018690 I
ADAC007927 Anopheles darlingi ADAC007927 I
AFAF000519 Anopheles farauti AFAF000519 I
AFUN000435 Anopheles funestus AFUN000435 I
AGAP005390 Anopheles gambiae AGAP005390 I
AMAM014424 Anopheles maculatus AMAM014424 I
AMEC006310 Anopheles melas AMEC006310 I
AMEM010751 Anopheles merus AMEM010751 I
AMIN007420 Anopheles minimus AMIN007420 I
AQUA007695 Anopheles quadriannulatus AQUA007695 I
GB42492 Apis mellifera GB42492 I
ACEP27778 Atta cephalotes ACEP27778 I
BGLB003738 Biomphalaria glabrata BGLB003738 I
e_gw.6.95.1 Branchiostoma floridae e_gw.6.95.1 I
CapteG19364 Capitella teleta CapteG19364 I
CGI_10005451 Crassostrea gigas CGI_10005451 I
CpipJ_CPIJ005455 Culex pipiens CpipJ_CPIJ005455 I
CPIJ005455 Culex quinquefasciatus CPIJ005455 I
DAPPUDRAFT_53927 Daphnia pulex DAPPUDRAFT_53927 I
YQE_07798 Dendroctonus ponderosae YQE_07798 I
GF25038 Drosophila ananassae FBgn0102030 I
GG14656 Drosophila erecta FBgn0106912 I
GH15211 Drosophila grimshawi FBgn0122686 I
Kah Drosophila melanogaster FBgn0035144 D
GI16731 Drosophila mojavensis FBgn0139479 I
GA14370 Drosophila pseudoobscura FBgn0074398 I
GM14272 Drosophila sechellia FBgn0169198 I
GJ12475 Drosophila virilis FBgn0199717 I
GK17557 Drosophila willistoni FBgn0219556 I
GE21016 Drosophila yakuba FBgn0238298 I
HelroG68814 Helobdella robusta HelroG68814 N
LDEC013204 Leptinotarsa decemlineata LDEC013204 I
LCUP006416 Lucilia cuprina LCUP006416 I
MDOA000347 Musca domestica MDOA000347 I
NV16451 Nasonia vitripennis NV16451 I
Ocbimv22026834m.g Octopus bimaculoides Ocbimv22026834m.g I
PHUM530390 Pediculus humanus PHUM530390 I
RPRC007744 Rhodnius prolixus RPRC007744 N
SINV14822 Solenopsis invicta SINV14822 I
SPU_015640 Strongylocentrotus purpuratus SPU_015640 I
tetur14g01820 Tetranychus urticae tetur14g01820 I
TC002803 Tribolium castaneum TC002803 I
L798_08219 Zootermopsis nevadensis L798_08219 I