CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSXMAG00000002498
(
Xiphophorus maculatus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSXMAG00000002498
T113739_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Osr2
M00132_2.00
Mus musculus
NGCTWCYGNN
NNCRGWAGCN
PBM
Badis et al.(2009)
Osr2_1727
0.827
1.000
Osr1
M00144_2.00
Mus musculus
NVCTHCYNN
NNRGDAGBN
PBM
Badis et al.(2009)
Osr1_3033
0.811
0.986
Osr1
M01174_2.00
Mus musculus
GCTACYGT
ACRGTAGC
PBM
Lambert et al.(2019)
pTH5339
0.811
0.986
OSR1
M04477_2.00
Homo sapiens
NGCTACYGTD
HACRGTAGCN
SELEX
Yin et al.(2017)
OSR1_eDBD_HT-SELEX
0.811
0.986
OSR1
M04478_2.00
Homo sapiens
NGCTACYGTD
HACRGTAGCN
SELEX
Yin et al.(2017)
OSR1_eDBD_Methyl-HT-SELEX
0.811
0.986
odd-2
M00618_2.00
Caenorhabditis elegans
NGCTACYGK
MCRGTAGCN
PBM
Narasimhan et al.(2015)
pTH9150
0.770
0.826
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSXMAP00000002494
C2H2 ZF
169
191
FICKFCGRHFTKSYNLLIHERTH
ENSXMAP00000002494
C2H2 ZF
197
219
YTCDICHKAFRRQDHLRDHRYIH
ENSXMAP00000002494
C2H2 ZF
225
247
FKCQECGKGFCQSRTLAVHKTLH
Links
Other
C2H2 ZF
family TFs
Other
Xiphophorus maculatus
TFs
135 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O1_08174
Capronia coronata
A1O1_08174
N
PV07_02928
Cladophialophora immunda
PV07_02928
N
A1O7_06693
Cladophialophora yegresii
A1O7_06693
N
HMPREF1541_08876
Cyphellophora europaea
HMPREF1541_08876
N
A1O9_11264
Exophiala aquamarina
A1O9_11264
N
HMPREF1120_04267
Exophiala dermatitidis
HMPREF1120_04267
N
PV10_08028
Exophiala mesophila
PV10_08028
N
PV06_02026
Exophiala oligosperma
PV06_02026
N
PV08_02834
Exophiala spinifera
PV08_02834
N
PV05_07919
Exophiala xenobiotica
PV05_07919
N
Z517_05714
Fonsecaea pedrosoi
Z517_05714
N
Z518_11031
Rhinocladiella mackenziei
Z518_11031
N