F775_04088 (Aegilops tauschii)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 F775_04088 T114341_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
STOP1
M06801_2.00 		Arabidopsis thaliana
CCTBCMCCAGDTRHHMCYY
RRGKDDYAHCTGGKGVAGG		 Dap-seq
OMalley et al.(2016)
STOP1_col_a 		0.803 0.929
STOP1
M06802_2.00 		Arabidopsis thaliana
RCCTNCMCCRGWWRN
NYWWCYGGKGNAGGY		 Dap-seq
OMalley et al.(2016)
STOP1_colamp_a 		0.803 0.929
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EMT26835 C2H2 ZF 350 372
EMT26835 C2H2 ZF 373 398

Links

Other C2H2 ZF family TFs
Other Aegilops tauschii TFs

65 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_040_00102 Aquilegia coerulea Aquca_040_00102 N
Bo6g099030 Brassica oleracea Bo6g099030 N
Bra004096 Brassica rapa Bra004096 N
Bra034007 Brassica rapa Bra034007 N
PK06349.1 Cannabis sativa PK06349.1 N
evm.TU.supercontig_43.77 Carica papaya evm.TU.supercontig_43.77 N
Ca_08511 Cicer arietinum Ca_08511 N
Ciclev10030636m.g Citrus clementina Ciclev10030636m.g N
orange1.1g044976m.g Citrus sinensis orange1.1g044976m.g N
Cucsa.349690 Cucumis sativus Cucsa.349690 N
Eucgr.H04623 Eucalyptus grandis Eucgr.H04623 N
Thhalv10018053m.g Eutrema salsugineum Thhalv10018053m.g N
GLYMA05G28090 Glycine max GLYMA05G28090 N
GLYMA18G00840 Glycine max GLYMA18G00840 N
GLYMA11G36930 Glycine max GLYMA11G36930 N
Gorai.009G332200 Gossypium raimondii Gorai.009G332200 N
Lus10003119.g Linum usitatissimum Lus10003119.g N
MDP0000262800 Malus domestica MDP0000262800 N
cassava42936.valid.m1 Manihot esculenta cassava42936.valid.m1 N
cassava6546.valid.m1 Manihot esculenta cassava6546.valid.m1 N
MTR_8g080800 Medicago truncatula MTR_8g080800 N
MTR_3g085050 Medicago truncatula MTR_3g085050 N
POPTR_0003s16910 Populus trichocarpa POPTR_0003s16910 N
POPTR_0001s13700 Populus trichocarpa POPTR_0001s13700 N
Pm007031 Prunus mume Pm007031 N
PRUPE_ppa000516mg Prunus persica PRUPE_ppa000516mg N
SapurV1A.0056s0050 Salix purpurea SapurV1A.0056s0050 N
SapurV1A.1172s0010 Salix purpurea SapurV1A.1172s0010 N
SapurV1A.1460s0040 Salix purpurea SapurV1A.1460s0040 N
Solyc05g015650.2 Solanum lycopersicum Solyc05g015650.2 N
TCM_008731 Theobroma cacao TCM_008731 N
VIT_01s0010g03850 Vitis vinifera VIT_01s0010g03850 N