GLRG_07822 (Colletotrichum graminicola)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 GLRG_07822 T118293_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NCU03184
M01474_2.00 		Neurospora crassa
NDNNVATCNN
NNGATBNNHN		 PBM
Najafabadi et al.(2015a)
pTH10252 		0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EFQ32678 C2H2 ZF 261 283
EFQ32678 C2H2 ZF 289 314

Links

Other C2H2 ZF family TFs
Other Colletotrichum graminicola TFs

128 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00019p00253580 Amborella trichopoda AMTR_s00019p00253580 N
PK04210.1 Cannabis sativa PK04210.1 N
evm.TU.supercontig_3189.1 Carica papaya evm.TU.supercontig_3189.1 N
Ca_14968 Cicer arietinum Ca_14968 N
Cla022486 Citrullus lanatus Cla022486 N
Ciclev10002056m.g Citrus clementina Ciclev10002056m.g N
orange1.1g022924m.g Citrus sinensis orange1.1g022924m.g N
Cucsa.160530 Cucumis sativus Cucsa.160530 N
Eucgr.F02157 Eucalyptus grandis Eucgr.F02157 N
gene26537-v1.0-hybrid Fragaria vesca gene26537-v1.0-hybrid N
GLYMA02G37980 Glycine max GLYMA02G37980 N
GLYMA14G36150 Glycine max GLYMA14G36150 N
GLYMA06G10280 Glycine max GLYMA06G10280 N
GLYMA04G10330 Glycine max GLYMA04G10330 N
Gorai.005G097100 Gossypium raimondii Gorai.005G097100 N
Gorai.009G279200 Gossypium raimondii Gorai.009G279200 N
Gorai.010G033500 Gossypium raimondii Gorai.010G033500 N
chr1.CM0289.360.nc Lotus japonicus chr1.CM0289.360.nc N
LjT45A20.70.nd Lotus japonicus LjT45A20.70.nd N
MDP0000303048 Malus domestica MDP0000303048 N
cassava249.valid.m1 Manihot esculenta cassava249.valid.m1 N
cassava1724.valid.m1 Manihot esculenta cassava1724.valid.m1 N
POPTR_0005s19580 Populus trichocarpa POPTR_0005s19580 N
POPTR_0002s11150 Populus trichocarpa POPTR_0002s11150 N
Pm004390 Prunus mume Pm004390 N
PRUPE_ppa009340mg Prunus persica PRUPE_ppa009340mg N
29596.m000720 Ricinus communis 29596.m000720 N
SapurV1A.0004s0630 Salix purpurea SapurV1A.0004s0630 N
SapurV1A.0320s0100 Salix purpurea SapurV1A.0320s0100 N
Solyc10g047640.1 Solanum lycopersicum Solyc10g047640.1 N
Solyc01g106030.2 Solanum lycopersicum Solyc01g106030.2 N
PGSC0003DMG400033576 Solanum tuberosum PGSC0003DMG400033576 N
TCM_034530 Theobroma cacao TCM_034530 N
TIFY1 Vitis vinifera VIT_18s0001g07720 N
VIT_03s0038g00480 Vitis vinifera VIT_03s0038g00480 N