GLYMA16G27280 (Glycine max)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 GLYMA16G27280 T118429_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
STOP1
M06801_2.00 		Arabidopsis thaliana
CCTBCMCCAGDTRHHMCYY
RRGKDDYAHCTGGKGVAGG		 Dap-seq
OMalley et al.(2016)
STOP1_col_a 		0.797 0.933
STOP1
M06802_2.00 		Arabidopsis thaliana
RCCTNCMCCRGWWRN
NYWWCYGGKGNAGGY		 Dap-seq
OMalley et al.(2016)
STOP1_colamp_a 		0.797 0.933
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA16G27280.1 C2H2 ZF 359 381
GLYMA16G27280.1 C2H2 ZF 380 411

Links

Other C2H2 ZF family TFs
Other Glycine max TFs

75 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AEPI011200 Anopheles epiroticus AEPI011200 N 0.000
Cmyd_10017545 Chelonia mydas Cmyd_10017545 N 0.000
DAPPUDRAFT_241731 Daphnia pulex DAPPUDRAFT_241731 N 0.000
Ogr11018 Ophisaurus gracilis Ogr11018 N 0.000
ENSPMAG00000002519 Petromyzon marinus ENSPMAG00000002519 N 0.000
ST18 Sorex araneus ENSSARG00000014015 N 0.000
EFV52052 Trichinella spiralis EFV52052 N 0.000
ENSXMAG00000007322 Xiphophorus maculatus ENSXMAG00000007322 N 0.000