LPERR01G33350 (Leersia perrieri)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 LPERR01G33350 T121893_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
STOP1
M06801_2.00 		Arabidopsis thaliana
CCTBCMCCAGDTRHHMCYY
RRGKDDYAHCTGGKGVAGG		 Dap-seq
OMalley et al.(2016)
STOP1_col_a 		0.803 0.929
STOP1
M06802_2.00 		Arabidopsis thaliana
RCCTNCMCCRGWWRN
NYWWCYGGKGNAGGY		 Dap-seq
OMalley et al.(2016)
STOP1_colamp_a 		0.803 0.929
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LPERR01G33350.1 C2H2 ZF 364 386
LPERR01G33350.1 C2H2 ZF 387 412
LPERR01G33350.2 C2H2 ZF 364 386
LPERR01G33350.2 C2H2 ZF 387 412
LPERR01G33350.3 C2H2 ZF 364 386
LPERR01G33350.3 C2H2 ZF 387 412

Links

Other C2H2 ZF family TFs
Other Leersia perrieri TFs

66 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_10624 Aegilops tauschii F775_10624 N 0.000
F775_18830 Aegilops tauschii F775_18830 N 0.000
F775_19744 Aegilops tauschii F775_19744 N 0.000
MLOC_38470 Hordeum vulgare MLOC_38470 N 0.000
LPERR04G17380 Leersia perrieri LPERR04G17380 N 0.000
LPERR04G17400 Leersia perrieri LPERR04G17400 I 0.000
LPERR08G11070 Leersia perrieri LPERR08G11070 N 0.000
OBART04G21370 Oryza barthii OBART04G21370 N 0.000
OBART04G21320 Oryza barthii OBART04G21320 N 0.000
OBART01G20350 Oryza barthii OBART01G20350 N 0.000
OB04G28390 Oryza brachyantha OB04G28390 N 0.000
OB04G28380 Oryza brachyantha OB04G28380 N 0.000
OB01G30110 Oryza brachyantha OB01G30110 N 0.000
OB04G28350 Oryza brachyantha OB04G28350 N 0.000
ORGLA04G0183800 Oryza glaberrima ORGLA04G0183800 N 0.000
ORGLA04G0183900 Oryza glaberrima ORGLA04G0183900 N 0.000
ORGLA11G0077500 Oryza glaberrima ORGLA11G0077500 N 0.000
OGLUM01G23970 Oryza glumaepatula OGLUM01G23970 N 0.000
OGLUM04G21260 Oryza glumaepatula OGLUM04G21260 N 0.000
OGLUM04G21350 Oryza glumaepatula OGLUM04G21350 N 0.000
BGIOSGA015472 Oryza indica BGIOSGA015472 N 0.000
BGIOSGA014567 Oryza indica BGIOSGA014567 N 0.000
BGIOSGA014566 Oryza indica BGIOSGA014566 N 0.000
BGIOSGA014565 Oryza indica BGIOSGA014565 N 0.000
BGIOSGA003819 Oryza indica BGIOSGA003819 N 0.000
BGIOSGA003821 Oryza indica BGIOSGA003821 N 0.000
OLONG_009946 Oryza longistaminata OLONG_009946 N 0.000
OLONG_016958 Oryza longistaminata OLONG_016958 N 0.000
OLONG_016960 Oryza longistaminata OLONG_016960 N 0.000
OMERI01G18770 Oryza meridionalis OMERI01G18770 N 0.000
OMERI04G17820 Oryza meridionalis OMERI04G17820 N 0.000
OMERI04G17790 Oryza meridionalis OMERI04G17790 N 0.000
ONIVA04G19650 Oryza nivara ONIVA04G19650 N 0.000
ONIVA04G19860 Oryza nivara ONIVA04G19860 N 0.000
ONIVA01G22980 Oryza nivara ONIVA01G22980 N 0.000
OPUNC04G19030 Oryza punctata OPUNC04G19030 N 0.000
OPUNC04G19040 Oryza punctata OPUNC04G19040 N 0.000
ORUFI01G23050 Oryza rufipogon ORUFI01G23050 N 0.000
ORUFI04G22890 Oryza rufipogon ORUFI04G22890 N 0.000
ORUFI04G22910 Oryza rufipogon ORUFI04G22910 N 0.000
ORUFI11G09150 Oryza rufipogon ORUFI11G09150 N 0.000
OS04G0557200 Oryza sativa OS04G0557200 N 0.000
OS04G0557800 Oryza sativa OS04G0557800 N 0.000
Pavir.Cb00833 Panicum virgatum Pavir.Cb00833 N 0.000
Pavir.J34298 Panicum virgatum Pavir.J34298 N 0.000
Si000845m.g Setaria italica Si000845m.g I 0.000
Si012401m.g Setaria italica Si012401m.g I 0.000
Sb06g025040 Sorghum bicolor Sb06g025040 I 0.000
Sb06g025060 Sorghum bicolor Sb06g025060 I 0.000
Traes_2AL_4F71A8FB4 Triticum aestivum Traes_2AL_4F71A8FB4 N 0.000
TRIUR3_18279 Triticum urartu TRIUR3_18279 N 0.000
TRIUR3_26157 Triticum urartu TRIUR3_26157 N 0.000
TRIUR3_35186 Triticum urartu TRIUR3_35186 N 0.000
GRMZM2G172795 Zea mays GRMZM2G172795 I 0.000