MCINX001355 (Melitaea cinxia)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 MCINX001355 T122843_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
esg
M06050_2.00 		Drosophila melanogaster
CACCTGH
DCAGGTG		 B1H
Zhu et al.(2011)
esg_SANGER_2.5_FBgn0001981 		0.783 0.860
wor
M03664_2.00 		Drosophila melanogaster
GYRACAGGTGYAH
DTRCACCTGTYRC		 SELEX
Nitta et al.(2015)
wor_1 		0.783 0.825
wor
M03665_2.00 		Drosophila melanogaster
DTRCACCTGTYGY
RCRACAGGTGYAH		 SELEX
Nitta et al.(2015)
wor_2 		0.783 0.825
wor
M06051_2.00 		Drosophila melanogaster
CACCTGY
RCAGGTG		 B1H
Zhu et al.(2011)
wor_SANGER_2.5_FBgn0001983 		0.783 0.825
wor
M06052_2.00 		Drosophila melanogaster
VCACCTGY
RCAGGTGB		 B1H
Zhu et al.(2011)
wor_SOLEXA_2.5_FBgn0001983 		0.783 0.825
SNAI2
M00221_2.00 		Homo sapiens
HACYTGH
DCARGTD		 PBM
Barrera et al.(2016)
SNAI2_REF 		0.757 0.789
SNAI2
M02873_2.00 		Homo sapiens
VCACCTGYN
NRCAGGTGB		 SELEX
Jolma et al.(2013)
SNAI2_1 		0.757 0.789
SNAI2
M04392_2.00 		Homo sapiens
YGCACCTGYY
RRCAGGTGCR		 SELEX
Yin et al.(2017)
SNAI2_eDBD_HT-SELEX 		0.757 0.789
SNAI2
M04394_2.00 		Homo sapiens
YRCACCTGYY
RRCAGGTGYR		 SELEX
Yin et al.(2017)
SNAI2_FL_HT-SELEX 		0.757 0.789
SNAI2
M08853_2.00 		Homo sapiens
NVCACCTGYY
RRCAGGTGBN		 Misc
Kulakovskiy et al.(2013)
SNAI2_HUMAN.H11MO.0.A 		0.757 0.789
Snai2
M08973_2.00 		Mus musculus
VNRCACCTGYY
RRCAGGTGYNB		 Misc
Kulakovskiy et al.(2013)
SNAI2_MOUSE.H11MO.0.A 		0.757 0.789
SNAI2
M10102_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SLUG_Q6_01 		0.757 0.789
SNAI2
M10103_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SLUG_Q6_02 		0.757 0.789
SNAI2
M10104_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SLUG_Q6 		0.757 0.789
SNAI2
M00220_2.00 		Homo sapiens
NHACCTGY
RCAGGTDN		 PBM
Barrera et al.(2016)
SNAI2_D119E 		0.757 0.789
SNAI2
M04393_2.00 		Homo sapiens
YRCACCTGYN
NRCAGGTGYR		 SELEX
Yin et al.(2017)
SNAI2_eDBD_Methyl-HT-SELEX 		0.757 0.789
SNAI2
M04395_2.00 		Homo sapiens
YRCACCTGYN
NRCAGGTGYR		 SELEX
Yin et al.(2017)
SNAI2_FL_Methyl-HT-SELEX 		0.757 0.789
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MCINX001355-PA C2H2 ZF 197 219
MCINX001355-PA C2H2 ZF 232 254
MCINX001355-PA C2H2 ZF 258 280
MCINX001355-PA C2H2 ZF 286 308
MCINX001355-PA C2H2 ZF 314 335

Links

Other C2H2 ZF family TFs
Other Melitaea cinxia TFs

119 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TVAG_549820 Trichomonas vaginalis TVAG_549820 N
TVAG_440000 Trichomonas vaginalis TVAG_440000 N
TVAG_462160 Trichomonas vaginalis TVAG_462160 N
TVAG_488180 Trichomonas vaginalis TVAG_488180 N
TVAG_492040 Trichomonas vaginalis TVAG_492040 N
TVAG_501380 Trichomonas vaginalis TVAG_501380 N
TVAG_519820 Trichomonas vaginalis TVAG_519820 N
TVAG_533990 Trichomonas vaginalis TVAG_533990 N
TVAG_536730 Trichomonas vaginalis TVAG_536730 N
TVAG_538650 Trichomonas vaginalis TVAG_538650 N
TVAG_430360 Trichomonas vaginalis TVAG_430360 N
TVAG_550950 Trichomonas vaginalis TVAG_550950 N
TVAG_557420 Trichomonas vaginalis TVAG_557420 N
TVAG_561010 Trichomonas vaginalis TVAG_561010 N
TVAG_582880 Trichomonas vaginalis TVAG_582880 N
TVAG_586030 Trichomonas vaginalis TVAG_586030 N
TVAG_586800 Trichomonas vaginalis TVAG_586800 N
TVAG_587380 Trichomonas vaginalis TVAG_587380 N
TVAG_598440 Trichomonas vaginalis TVAG_598440 N
TVAG_603120 Trichomonas vaginalis TVAG_603120 N
TVAG_181410 Trichomonas vaginalis TVAG_181410 N
TVAG_031350 Trichomonas vaginalis TVAG_031350 N
TVAG_031380 Trichomonas vaginalis TVAG_031380 N
TVAG_072840 Trichomonas vaginalis TVAG_072840 N
TVAG_082330 Trichomonas vaginalis TVAG_082330 N
TVAG_086690 Trichomonas vaginalis TVAG_086690 N
TVAG_088420 Trichomonas vaginalis TVAG_088420 N
TVAG_096530 Trichomonas vaginalis TVAG_096530 N
TVAG_125920 Trichomonas vaginalis TVAG_125920 N
TVAG_166050 Trichomonas vaginalis TVAG_166050 N
TVAG_017720 Trichomonas vaginalis TVAG_017720 N
TVAG_191300 Trichomonas vaginalis TVAG_191300 N
TVAG_206490 Trichomonas vaginalis TVAG_206490 N
TVAG_216600 Trichomonas vaginalis TVAG_216600 N
TVAG_223270 Trichomonas vaginalis TVAG_223270 N
TVAG_229040 Trichomonas vaginalis TVAG_229040 N
TVAG_285330 Trichomonas vaginalis TVAG_285330 N
TVAG_341860 Trichomonas vaginalis TVAG_341860 N
TVAG_406160 Trichomonas vaginalis TVAG_406160 N
TVAG_413790 Trichomonas vaginalis TVAG_413790 N