CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
PVAR5_8008
(
Byssochlamys spectabilis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
PVAR5_8008
T127771_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
XP_001539264.1
M01472_2.00
Histoplasma capsulatum
MCCCCACYYH
DRRGTGGGGK
PBM
Najafabadi et al.(2015a)
pTH11150
0.764
0.844
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GAD99297
C2H2 ZF
27
51
HACDFPGCGKSFTRAEHLRRHALNH
GAD99297
C2H2 ZF
57
78
SCERCGVHFTRPDLLGRHMMRH
Links
Other
C2H2 ZF
family TFs
Other
Byssochlamys spectabilis
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CADAFLAG00011240
Aspergillus flavus
CADAFLAG00011240
N
0.756
BDDG_05885
Blastomyces dermatitidis
BDDG_05885
I
0.764
PVAR5_3492
Byssochlamys spectabilis
PVAR5_3492
N
0.756
GLRG_11296
Colletotrichum graminicola
GLRG_11296
N
0.760
EPUS_05070
Endocarpon pusillum
EPUS_05070
N
0.756
XP_001539264.1
Histoplasma capsulatum
XP_001539264.1
D
0.764
PABG_12465
Paracoccidioides brasiliensis
PABG_12465
I
0.764
PAAG_11662
Paracoccidioides sp lutzii
PAAG_11662
I
0.764
TSTA_050470
Talaromyces stipitatus
TSTA_050470
I
0.778