SINV16941 (Solenopsis invicta)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 SINV16941 T128825_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GLIS1
M02911_2.00 		Homo sapiens
MGACCCCCCACGWHGN
NCDWCGTGGGGGGTCK		 SELEX
Jolma et al.(2013)
GLIS1_1 		0.793 0.868
GLIS1
M04564_2.00 		Homo sapiens
BMCCCCCCRCVDHSH
DSDHBGYGGGGGGKV		 SELEX
Yin et al.(2017)
GLIS1_eDBD_HT-SELEX 		0.793 0.868
GLIS1
M08345_2.00 		Homo sapiens
SNSYSYRGGRGGBV
BVCCYCCYRSRSNS		 ChIP-seq
Schmitges et al.(2016)
Q8NBF1.MEME 		0.793 0.868
GLIS1
M04565_2.00 		Homo sapiens
DCWHNGTGGGGGGTV
BACCCCCCACNDWGH		 SELEX
Yin et al.(2017)
GLIS1_eDBD_Methyl-HT-SELEX 		0.793 0.868
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SINV16941-PA C2H2 ZF 935 961
SINV16941-PA C2H2 ZF 968 991
SINV16941-PA C2H2 ZF 997 1021
SINV16941-PA C2H2 ZF 1027 1051

Links

Other C2H2 ZF family TFs
Other Solenopsis invicta TFs

43 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00056p00064760 Amborella trichopoda AMTR_s00056p00064760 I
AMTR_s00111p00051610 Amborella trichopoda AMTR_s00111p00051610 I
Aquca_011_00566 Aquilegia coerulea Aquca_011_00566 I
fgenesh2_kg.4__2683__AT2G44940.1 Arabidopsis lyrata fgenesh2_kg.4__2683__AT2G44940.1 I
fgenesh2_kg.5__2513__AT3G60490.1 Arabidopsis lyrata fgenesh2_kg.5__2513__AT3G60490.1 I
TINY2 Arabidopsis lyrata fgenesh2_kg.6__1130__AT5G11590.1 I
scaffold_700899.1 Arabidopsis lyrata scaffold_700899.1 I
ERF034 Arabidopsis thaliana AT2G44940 D
ERF035 Arabidopsis thaliana AT3G60490 D
ERF043 Arabidopsis thaliana AT4G32800 D
DREB3 Arabidopsis thaliana AT5G11590 I
TINY Arabidopsis thaliana AT5G25810 D
Bostr.13158s0050 Boechera stricta Bostr.13158s0050 I
Bostr.20055s0079 Boechera stricta Bostr.20055s0079 I
Bostr.25993s0277 Boechera stricta Bostr.25993s0277 I
Bostr.26326s0067 Boechera stricta Bostr.26326s0067 I
Bostr.29827s0238 Boechera stricta Bostr.29827s0238 I
Bostr.7867s1130 Boechera stricta Bostr.7867s1130 I
BRADI3G50620 Brachypodium distachyon BRADI3G50620 I
Bo2g010530 Brassica oleracea Bo2g010530 I
Bo3g028500 Brassica oleracea Bo3g028500 I
Bo3g037480 Brassica oleracea Bo3g037480 I
Bo3g171090 Brassica oleracea Bo3g171090 I
Bo4g024220 Brassica oleracea Bo4g024220 I
Bo4g195280 Brassica oleracea Bo4g195280 I
Bo6g077080 Brassica oleracea Bo6g077080 I
Bo7g095710 Brassica oleracea Bo7g095710 I
Bo7g115860 Brassica oleracea Bo7g115860 I
Bo8g095240 Brassica oleracea Bo8g095240 I
Bo9g011210 Brassica oleracea Bo9g011210 I
Bo9g170060 Brassica oleracea Bo9g170060 I
Bra000366 Brassica rapa Bra000366 I
Bra003415 Brassica rapa Bra003415 I
Bra004878 Brassica rapa Bra004878 I
Bra007539 Brassica rapa Bra007539 I
Bra008952 Brassica rapa Bra008952 I
Bra009862 Brassica rapa Bra009862 I
Bra023026 Brassica rapa Bra023026 I
Bra023332 Brassica rapa Bra023332 I
Bra034535 Brassica rapa Bra034535 I
Bra036552 Brassica rapa Bra036552 I
Bra037041 Brassica rapa Bra037041 I
Bra040333 Brassica rapa Bra040333 I
PK25970.1 Cannabis sativa PK25970.1 I
PK28082.1 Cannabis sativa PK28082.1 I
Cagra.0239s0048 Capsella grandiflora Cagra.0239s0048 I
Cagra.3527s0003 Capsella grandiflora Cagra.3527s0003 I
Cagra.4093s0009 Capsella grandiflora Cagra.4093s0009 I
Carubv10002601m.g Capsella rubella Carubv10002601m.g I
Carubv10003136m.g Capsella rubella Carubv10003136m.g I
Carubv10006567m.g Capsella rubella Carubv10006567m.g I
Carubv10017799m.g Capsella rubella Carubv10017799m.g I
Carubv10023699m.g Capsella rubella Carubv10023699m.g I
evm.TU.supercontig_101.39 Carica papaya evm.TU.supercontig_101.39 I
evm.TU.supercontig_7.269 Carica papaya evm.TU.supercontig_7.269 I
evm.TU.supercontig_89.73 Carica papaya evm.TU.supercontig_89.73 I
Ca_01908 Cicer arietinum Ca_01908 I
Ca_12765 Cicer arietinum Ca_12765 I
Ca_14911 Cicer arietinum Ca_14911 I
Ca_18948 Cicer arietinum Ca_18948 I
Ca_28185 Cicer arietinum Ca_28185 I
Cla015715 Citrullus lanatus Cla015715 I
Cla021417 Citrullus lanatus Cla021417 I
Cla022553 Citrullus lanatus Cla022553 I
Ciclev10009370m.g Citrus clementina Ciclev10009370m.g I
Ciclev10021740m.g Citrus clementina Ciclev10021740m.g I
orange1.1g024791m.g Citrus sinensis orange1.1g024791m.g I
orange1.1g027107m.g Citrus sinensis orange1.1g027107m.g I
Cucsa.161310 Cucumis sativus Cucsa.161310 I
Cucsa.359390 Cucumis sativus Cucsa.359390 I
Eucgr.C00546 Eucalyptus grandis Eucgr.C00546 I
Eucgr.C02928 Eucalyptus grandis Eucgr.C02928 I
Eucgr.E01593 Eucalyptus grandis Eucgr.E01593 I
Eucgr.F03062 Eucalyptus grandis Eucgr.F03062 I
Thhalv10001792m.g Eutrema salsugineum Thhalv10001792m.g I
Thhalv10004870m.g Eutrema salsugineum Thhalv10004870m.g I
Thhalv10006200m.g Eutrema salsugineum Thhalv10006200m.g I
Thhalv10015895m.g Eutrema salsugineum Thhalv10015895m.g I
Thhalv10026204m.g Eutrema salsugineum Thhalv10026204m.g I
gene04810-v1.0-hybrid Fragaria vesca gene04810-v1.0-hybrid I
gene08838-v1.0-hybrid Fragaria vesca gene08838-v1.0-hybrid I
gene08873-v1.0-hybrid Fragaria vesca gene08873-v1.0-hybrid I
gene08876-v1.0-hybrid Fragaria vesca gene08876-v1.0-hybrid I
gene25758-v1.0-hybrid Fragaria vesca gene25758-v1.0-hybrid I
GLYMA03G27050 Glycine max GLYMA03G27050 I
GLYMA04G08901 Glycine max GLYMA04G08901 I
GLYMA06G08990 Glycine max GLYMA06G08990 I
GLYMA07G02001 Glycine max GLYMA07G02001 I
GLYMA07G14560 Glycine max GLYMA07G14560 I
GLYMA08G21650 Glycine max GLYMA08G21650 I
GLYMA13G43210 Glycine max GLYMA13G43210 I
GLYMA14G22740 Glycine max GLYMA14G22740 I
GLYMA15G02130 Glycine max GLYMA15G02130 I
GLYMA16G32330 Glycine max GLYMA16G32330 I
GLYMA17G27520 Glycine max GLYMA17G27520 I
Gorai.003G175100 Gossypium raimondii Gorai.003G175100 I
Gorai.004G165300 Gossypium raimondii Gorai.004G165300 I
Gorai.004G289800 Gossypium raimondii Gorai.004G289800 I
Gorai.009G050200 Gossypium raimondii Gorai.009G050200 I
Gorai.009G136500 Gossypium raimondii Gorai.009G136500 I
Gorai.010G106600 Gossypium raimondii Gorai.010G106600 I
MLOC_3095 Hordeum vulgare MLOC_3095 I
MLOC_75601 Hordeum vulgare MLOC_75601 I
LPERR02G21590 Leersia perrieri LPERR02G21590 I
Lus10001601.g Linum usitatissimum Lus10001601.g I
Lus10002801.g Linum usitatissimum Lus10002801.g I
Lus10004738.g Linum usitatissimum Lus10004738.g I
Lus10007799.g Linum usitatissimum Lus10007799.g I
Lus10025834.g Linum usitatissimum Lus10025834.g I
Lus10038270.g Linum usitatissimum Lus10038270.g I
Lus10038607.g Linum usitatissimum Lus10038607.g I
chr1.CM0171.140.nc Lotus japonicus chr1.CM0171.140.nc I
chr1.LjT23O20.60.nd Lotus japonicus chr1.LjT23O20.60.nd I
chr3.LjT42M03.60.nd Lotus japonicus chr3.LjT42M03.60.nd I
LjT33K05.50.nd Lotus japonicus LjT33K05.50.nd I
LjT33K05.60.nd Lotus japonicus LjT33K05.60.nd I
MDP0000174352 Malus domestica MDP0000174352 I
MDP0000241650 Malus domestica MDP0000241650 I
MDP0000242611 Malus domestica MDP0000242611 I
MDP0000790788 Malus domestica MDP0000790788 I
cassava17185.m1 Manihot esculenta cassava17185.m1 I
cassava18256.valid.m1 Manihot esculenta cassava18256.valid.m1 I
cassava19875.m1 Manihot esculenta cassava19875.m1 I
cassava19912.m1 Manihot esculenta cassava19912.m1 I
cassava33300.m1 Manihot esculenta cassava33300.m1 I
cassava4979.m1 Manihot esculenta cassava4979.m1 I
MTR_1g006660 Medicago truncatula MTR_1g006660 I
MTR_3g110205 Medicago truncatula MTR_3g110205 I
MTR_5g012910 Medicago truncatula MTR_5g012910 I
MTR_8g006410 Medicago truncatula MTR_8g006410 I
MTR_8g013860 Medicago truncatula MTR_8g013860 I
mgf022971m Mimulus guttatus mgf022971m I
mgf024703m Mimulus guttatus mgf024703m I
mgf026339m Mimulus guttatus mgf026339m I
GSMUA_Achr10G21470_001 Musa acuminata GSMUA_Achr10G21470_001 I
GSMUA_Achr10G27680_001 Musa acuminata GSMUA_Achr10G27680_001 I
GSMUA_Achr1G01620_001 Musa acuminata GSMUA_Achr1G01620_001 I
GSMUA_Achr1G04350_001 Musa acuminata GSMUA_Achr1G04350_001 I
GSMUA_Achr7G09450_001 Musa acuminata GSMUA_Achr7G09450_001 I
OBART04G20820 Oryza barthii OBART04G20820 I
OB04G27840 Oryza brachyantha OB04G27840 I
ORGLA02G0228000 Oryza glaberrima ORGLA02G0228000 I
ORGLA04G0178600 Oryza glaberrima ORGLA04G0178600 I
ORGLA04G0178700 Oryza glaberrima ORGLA04G0178700 I
ORGLA04G0179000 Oryza glaberrima ORGLA04G0179000 I
OGLUM02G27010 Oryza glumaepatula OGLUM02G27010 I
OGLUM02G27070 Oryza glumaepatula OGLUM02G27070 I
OGLUM04G20750 Oryza glumaepatula OGLUM04G20750 I
OGLUM04G20760 Oryza glumaepatula OGLUM04G20760 I
OGLUM04G20790 Oryza glumaepatula OGLUM04G20790 I
BGIOSGA016882 Oryza indica BGIOSGA016882 I
BGIOSGA016883 Oryza indica BGIOSGA016883 I
BGIOSGA016884 Oryza indica BGIOSGA016884 I
OMERI02G25900 Oryza meridionalis OMERI02G25900 I
OMERI02G25910 Oryza meridionalis OMERI02G25910 I
OMERI04G17260 Oryza meridionalis OMERI04G17260 I
OMERI04G17270 Oryza meridionalis OMERI04G17270 I
OMERI04G17290 Oryza meridionalis OMERI04G17290 I
ONIVA02G28960 Oryza nivara ONIVA02G28960 I
ONIVA02G28990 Oryza nivara ONIVA02G28990 I
ONIVA04G19040 Oryza nivara ONIVA04G19040 I
ONIVA04G19060 Oryza nivara ONIVA04G19060 I
ONIVA04G19090 Oryza nivara ONIVA04G19090 I
OPUNC02G24210 Oryza punctata OPUNC02G24210 I
OPUNC02G24230 Oryza punctata OPUNC02G24230 I
OPUNC04G18500 Oryza punctata OPUNC04G18500 I
OPUNC04G18520 Oryza punctata OPUNC04G18520 I
OPUNC04G18530 Oryza punctata OPUNC04G18530 I
ORUFI02G28010 Oryza rufipogon ORUFI02G28010 I
ORUFI04G22400 Oryza rufipogon ORUFI04G22400 I
ORUFI04G22410 Oryza rufipogon ORUFI04G22410 I
ORUFI04G22430 Oryza rufipogon ORUFI04G22430 I
ORUFI10G19670 Oryza rufipogon ORUFI10G19670 I
OS02G0656600 Oryza sativa OS02G0656600 I
OS02G0657000 Oryza sativa OS02G0657000 I
OS04G0549700 Oryza sativa OS04G0549700 I
OS04G0549800 Oryza sativa OS04G0549800 I
OS04G0550200 Oryza sativa OS04G0550200 I
Pavir.Ga01093 Panicum virgatum Pavir.Ga01093 I
Pavir.Ga01095 Panicum virgatum Pavir.Ga01095 I
Pavir.Gb01128 Panicum virgatum Pavir.Gb01128 I
Pavir.J17742 Panicum virgatum Pavir.J17742 I
POPTR_0002s14210 Populus trichocarpa POPTR_0002s14210 I
POPTR_0006s25500 Populus trichocarpa POPTR_0006s25500 I
Pm005151 Prunus mume Pm005151 I
Pm017610 Prunus mume Pm017610 I
Pm019386 Prunus mume Pm019386 I
Pm023417 Prunus mume Pm023417 I
PRUPE_ppa009533mg Prunus persica PRUPE_ppa009533mg I
PRUPE_ppa009812mg Prunus persica PRUPE_ppa009812mg I
PRUPE_ppa010340mg Prunus persica PRUPE_ppa010340mg I
28353.m000054 Ricinus communis 28353.m000054 I
29794.m003381 Ricinus communis 29794.m003381 I
30146.m003535 Ricinus communis 30146.m003535 I
30174.m008790 Ricinus communis 30174.m008790 I
SapurV1A.0033s0230 Salix purpurea SapurV1A.0033s0230 I
SapurV1A.0272s0090 Salix purpurea SapurV1A.0272s0090 I
SapurV1A.0291s0070 Salix purpurea SapurV1A.0291s0070 I
SapurV1A.0805s0100 Salix purpurea SapurV1A.0805s0100 I
SELMODRAFT_104978 Selaginella moellendorffii SELMODRAFT_104978 I
SELMODRAFT_125385 Selaginella moellendorffii SELMODRAFT_125385 I
Si010703m.g Setaria italica Si010703m.g I
Si012254m.g Setaria italica Si012254m.g I
Solyc01g090560.2 Solanum lycopersicum Solyc01g090560.2 I
Solyc03g120840.1 Solanum lycopersicum Solyc03g120840.1 I
Solyc05g050830.1 Solanum lycopersicum Solyc05g050830.1 I
Solyc06g066540.1 Solanum lycopersicum Solyc06g066540.1 I
Solyc08g066660.1 Solanum lycopersicum Solyc08g066660.1 I
Solyc08g078410.1 Solanum lycopersicum Solyc08g078410.1 I
Solyc08g078420.1 Solanum lycopersicum Solyc08g078420.1 I
Solyc12g044390.1 Solanum lycopersicum Solyc12g044390.1 I
PGSC0003DMG400002235 Solanum tuberosum PGSC0003DMG400002235 I
PGSC0003DMG400002620 Solanum tuberosum PGSC0003DMG400002620 I
PGSC0003DMG400004825 Solanum tuberosum PGSC0003DMG400004825 I
PGSC0003DMG400004826 Solanum tuberosum PGSC0003DMG400004826 I
PGSC0003DMG400007025 Solanum tuberosum PGSC0003DMG400007025 I
PGSC0003DMG400012087 Solanum tuberosum PGSC0003DMG400012087 I
PGSC0003DMG400018581 Solanum tuberosum PGSC0003DMG400018581 I
PGSC0003DMG400026035 Solanum tuberosum PGSC0003DMG400026035 I
PGSC0003DMG400026461 Solanum tuberosum PGSC0003DMG400026461 I
Sb06g024530 Sorghum bicolor Sb06g024530 I
TCM_005639 Theobroma cacao TCM_005639 I
TCM_014892 Theobroma cacao TCM_014892 I
TCM_015930 Theobroma cacao TCM_015930 I
TCM_028851 Theobroma cacao TCM_028851 I
TCM_037194 Theobroma cacao TCM_037194 I
Traes_2AL_45E6314EF Triticum aestivum Traes_2AL_45E6314EF I
Traes_2BL_593E1CCC2 Triticum aestivum Traes_2BL_593E1CCC2 I
Traes_6DL_3019F176A Triticum aestivum Traes_6DL_3019F176A I
Traes_6DL_901793D6D Triticum aestivum Traes_6DL_901793D6D I
VIT_00s0341g00070 Vitis vinifera VIT_00s0341g00070 I
VIT_00s0341g00080 Vitis vinifera VIT_00s0341g00080 I
VIT_00s0632g00010 Vitis vinifera VIT_00s0632g00010 I
VIT_04s0008g03400 Vitis vinifera VIT_04s0008g03400 I
VIT_09s0002g03940 Vitis vinifera VIT_09s0002g03940 I
VIT_14s0006g02290 Vitis vinifera VIT_14s0006g02290 I
VIT_15s0021g02110 Vitis vinifera VIT_15s0021g02110 I