Afo_R007843 (Aptenodytes forsteri)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Afo_R007843 T132832_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
OVOL2
M00235_2.00 		Homo sapiens
NCCGYTANNN
NNNTARCGGN		 PBM
Barrera et al.(2016)
OVOL2_REF 		0.812 0.946
OVOL2
M04445_2.00 		Homo sapiens
NNHCCGYTANNHN
NDNNTARCGGDNN		 SELEX
Yin et al.(2017)
OVOL2_eDBD_HT-SELEX 		0.812 0.946
OVOL2
M04447_2.00 		Homo sapiens
DDWCCGTTABNHN
NDNVTAACGGWHH		 SELEX
Yin et al.(2017)
OVOL2_FL_HT-SELEX 		0.812 0.946
OVOL2
M10207_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MOVOB_01 		0.812 0.946
OVOL2
M04446_2.00 		Homo sapiens
NNWCCGTTANNHN
NDNNTAACGGWNN		 SELEX
Yin et al.(2017)
OVOL2_eDBD_Methyl-HT-SELEX 		0.812 0.946
OVOL2
M04448_2.00 		Homo sapiens
DDWCCGTTABNHN
NDNVTAACGGWHH		 SELEX
Yin et al.(2017)
OVOL2_FL_Methyl-HT-SELEX 		0.812 0.946
Ovol2
M08993_2.00 		Mus musculus
HCCGTTAN
NTAACGGD		 Misc
Kulakovskiy et al.(2013)
OVOL2_MOUSE.H11MO.0.C 		0.803 0.935
OVOL2
M00234_2.00 		Homo sapiens
NCCGYTANNN
NNNTARCGGN		 PBM
Barrera et al.(2016)
OVOL2_D228E 		0.757 0.935
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Afo_R007843 C2H2 ZF 66 88
Afo_R007843 C2H2 ZF 91 116
Afo_R007843 C2H2 ZF 122 145
Afo_R007843 C2H2 ZF 161 184

Links

Other C2H2 ZF family TFs
Other Aptenodytes forsteri TFs

53 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000005266 Ailuropoda melanoleuca ENSAMEG00000005266 I 0.812
Alligator_sinensis_CCG008208.1 Alligator sinensis Alligator_sinensis_CCG008208.1 I 0.812
ENSAPLG00000016199 Anas platyrhynchos ENSAPLG00000016199 I 0.812
OVOL2 Anolis carolinensis ENSACAG00000014216 I 0.780
ENSBTAP00000011067-D1 Bos grunniens ENSBTAP00000011067-D1 I 0.798
OVOL2 Bos taurus ENSBTAG00000008410 I 0.798
Brh_R002739 Buceros rhinoceros Brh_R002739 I 0.827
Aan_R006310 Calypte anna Aan_R006310 I 0.827
OVOL2 Canis familiaris ENSCAFG00000005453 I 0.800
ENSCPOG00000007912 Cavia porcellus ENSCPOG00000007912 I 0.814
Cmyd_10010114 Chelonia mydas Cmyd_10010114 I 0.807
ENSCSAG00000011547 Chlorocebus sabaeus ENSCSAG00000011547 I 0.812
Ovol2 Dipodomys ordii ENSDORG00000016697 I 0.815
OVOL2 Echinops telfairi ENSETEG00000006907 I 0.803
OVOL2 Equus caballus ENSECAG00000007899 I 0.812
OVOL2 Felis catus ENSFCAG00000027530 I 0.812
ENSFALG00000007594 Ficedula albicollis ENSFALG00000007594 I 0.822
OVOL2 Gallus gallus ENSGALG00000008702 I 0.822
Gfo_R008104 Geospiza fortis Gfo_R008104 I 0.762
OVOL2 Gorilla gorilla ENSGGOG00000024444 I 0.812
OVOL2 Homo sapiens ENSG00000125850 D 0.812
ENSSTOG00000024979 Ictidomys tridecemlineatus ENSSTOG00000024979 I 0.809
OVOL2 Loxodonta africana ENSLAFG00000010597 I 0.812
ENSP00000278780 Macaca fascicularis ENSP00000278780 I 0.812
ENSMMUG00000021621 Macaca mulatta ENSMMUG00000021621 I 0.812
ENSMEUG00000011922 Macropus eugenii ENSMEUG00000011922 I 0.784
ENSMGAG00000006770 Meleagris gallopavo ENSMGAG00000006770 I 0.822
ENSMICG00000017455 Microcebus murinus ENSMICG00000017455 I 0.812
OVOL2 Monodelphis domestica ENSMODG00000005504 I 0.814
ENSMPUG00000001295 Mustela putorius furo ENSMPUG00000001295 I 0.812
Ovol2 Mus musculus ENSMUSG00000037279 D 0.803
Myotis_brandtii_Ovol2_10029083 Myotis brandtii Myotis_brandtii_Ovol2_10029083 I 0.812
ENSMLUG00000026760 Myotis lucifugus ENSMLUG00000026760 I 0.812
ENSNLEG00000009741 Nomascus leucogenys ENSNLEG00000009741 I 0.812
OVOL2 Ochotona princeps ENSOPRG00000015054 I 0.805
Ogr08372 Ophisaurus gracilis Ogr08372 I 0.777
ENSOANG00000001250 Ornithorhynchus anatinus ENSOANG00000001250 I 0.807
OVOL2 Oryctolagus cuniculus ENSOCUG00000012116 I 0.812
OVOL2 Otolemur garnettii ENSOGAG00000030325 I 0.812
ENSOARG00000018244 Ovis aries ENSOARG00000018244 I 0.810
OVOL2 Pan troglodytes ENSPTRG00000013280 I 0.812
ENSPANG00000025538 Papio anubis ENSPANG00000025538 I 0.812
ENSPSIG00000006768 Pelodiscus sinensis ENSPSIG00000006768 I 0.807
Pvit_03654 Pogona vitticeps Pvit_03654 I 0.784
ENSPPYG00000010732 Pongo abelii ENSPPYG00000010732 I 0.812
OVOL2 Pteropus vampyrus ENSPVAG00000001140 I 0.809
Ovol2 Rattus norvegicus ENSRNOG00000006850 I 0.803
ENSSHAG00000018466 Sarcophilus harrisii ENSSHAG00000018466 I 0.814
ENSSARG00000006563 Sorex araneus ENSSARG00000006563 I 0.808
OVOL2 Taeniopygia guttata ENSTGUG00000005909 I 0.822
OVOL2 Tursiops truncatus ENSTTRG00000016430 I 0.798
Tal_R010801 Tyto alba Tal_R010801 I 0.827
ovol2 Xenopus tropicalis XB-GENE-854193 I 0.811