Afo_R013608 (Aptenodytes forsteri)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Afo_R013608 T132911_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
VEZF1
M01172_2.00 		Homo sapiens
CCCCCCMYNN
NNRKGGGGGG		 PBM
Lambert et al.(2019)
pTH11265 		0.825 0.989
VEZF1
M08893_2.00 		Homo sapiens
YYYYBCYYYYTCCYYYYYYYYH
DRRRRRRRRGGARRRRGVRRRR		 Misc
Kulakovskiy et al.(2013)
VEZF1_HUMAN.H11MO.0.C 		0.825 0.989
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Afo_R013608 C2H2 ZF 164 186
Afo_R013608 C2H2 ZF 192 214
Afo_R013608 C2H2 ZF 222 245
Afo_R013608 C2H2 ZF 251 273

Links

Other C2H2 ZF family TFs
Other Aptenodytes forsteri TFs

56 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000015606 Ailuropoda melanoleuca ENSAMEG00000015606 I
Alligator_sinensis_CCG013447.1 Alligator sinensis Alligator_sinensis_CCG013447.1 I
ENSP00000357000-D1 Bos grunniens ENSP00000357000-D1 I
USF1 Bos taurus ENSBTAG00000017873 I
USF1 Callithrix jacchus ENSCJAG00000005396 I
USF1 Canis familiaris ENSCAFG00000012689 I
USF1 Cavia porcellus ENSCPOG00000003957 I
ENSCSAG00000002622 Chlorocebus sabaeus ENSCSAG00000002622 I
USF1 Choloepus hoffmanni ENSCHOG00000011010 I
ARHGAP30 Dasypus novemcinctus ENSDNOG00000005811 I
USF1 Equus caballus ENSECAG00000004755 I
USF1 Felis catus ENSFCAG00000012307 I
USF1 Gorilla gorilla ENSGGOG00000003935 I
USF1 Homo sapiens ENSG00000158773 D
ENSSTOG00000012364 Ictidomys tridecemlineatus ENSSTOG00000012364 I
ENSLACG00000001157 Latimeria chalumnae ENSLACG00000001157 I
ENSLOCG00000000641 Lepisosteus oculatus ENSLOCG00000000641 I
USF1 Loxodonta africana ENSLAFG00000011338 I
ENSMMUP00000002682 Macaca fascicularis ENSMMUP00000002682 I
USF1 Macaca mulatta ENSMMUG00000002003 I
ENSMEUG00000009683 Macropus eugenii ENSMEUG00000009683 I
USF1 Microcebus murinus ENSMICG00000007199 I
USF1 Monodelphis domestica ENSMODG00000005443 I
ENSMPUG00000014181 Mustela putorius furo ENSMPUG00000014181 I
Usf1 Mus musculus ENSMUSG00000026641 D
USF1 Myotis lucifugus ENSMLUG00000009179 I
ENSNLEG00000013935 Nomascus leucogenys ENSNLEG00000013935 I
USF1 Ochotona princeps ENSOPRG00000003858 I
Ogr08237 Ophisaurus gracilis Ogr08237 I
ENSONIG00000016360 Oreochromis niloticus ENSONIG00000016360 I
USF1 Oryctolagus cuniculus ENSOCUG00000002352 I
ENSOGAG00000006705 Otolemur garnettii ENSOGAG00000006705 I
ENSOARG00000009376 Ovis aries ENSOARG00000009376 I
ENSOARG00000003162 Ovis aries ENSOARG00000003162 I
USF1 Pan troglodytes ENSPTRG00000001565 I
ENSPANG00000016141 Papio anubis ENSPANG00000016141 I
PHUM287950 Pediculus humanus PHUM287950 I
ENSPSIG00000008116 Pelodiscus sinensis ENSPSIG00000008116 I
Pvit_07548 Pogona vitticeps Pvit_07548 I
ENSPPYG00000000619 Pongo abelii ENSPPYG00000000619 I
Usf1 Rattus norvegicus ENSRNOG00000004255 I
ENSSHAG00000016124 Sarcophilus harrisii ENSSHAG00000016124 I
USF1 Sus scrofa ENSSSCG00000006371 I
USF1 Tupaia belangeri ENSTBEG00000003164 I
USF1 Tursiops truncatus ENSTTRG00000009151 I
USF1 Vicugna pacos ENSVPAG00000008421 I
B39674 Xenopus laevis B39674 I
usf1.S Xenopus laevis XB-GENE-6255904 I
usf1 Xenopus tropicalis XB-GENE-5918718 I