CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ca_08787
(
Cicer arietinum
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Ca_08787
T133697_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ca_08787
C2H2 ZF
1334
1357
YQCDIEGCTMSFGSKQELVHHKRN
Ca_08787
C2H2 ZF
1358
1381
ICPVKGCGKKFFSHKYLVQHRRVH
Ca_08787
C2H2 ZF
1417
1443
YVCAEPGCGQTFRFVSDFSRHKRKTGH
Links
Other
C2H2 ZF
family TFs
Other
Cicer arietinum
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aquca_011_00361
Aquilegia coerulea
Aquca_011_00361
N
0.767
evm.TU.supercontig_4.49
Carica papaya
evm.TU.supercontig_4.49
N
0.765
Ciclev10018473m.g
Citrus clementina
Ciclev10018473m.g
N
0.757
GLYMA04G36620
Glycine max
GLYMA04G36620
N
0.797
GLYMA04G36630
Glycine max
GLYMA04G36630
N
0.810
GLYMA06G18290
Glycine max
GLYMA06G18290
N
0.787
GLYMA06G18300
Glycine max
GLYMA06G18300
N
0.803
Gorai.006G270100
Gossypium raimondii
Gorai.006G270100
N
0.773
Lus10043332.g
Linum usitatissimum
Lus10043332.g
N
0.768
cassava3225.m1
Manihot esculenta
cassava3225.m1
N
0.764
POPTR_0012s09390
Populus trichocarpa
POPTR_0012s09390
N
0.768
POPTR_0015s10040
Populus trichocarpa
POPTR_0015s10040
N
0.768
30147.m013814
Ricinus communis
30147.m013814
N
0.768
SapurV1A.0486s0080
Salix purpurea
SapurV1A.0486s0080
N
0.768
TCM_014549
Theobroma cacao
TCM_014549
N
0.767