Cmyd_10005916 (Chelonia mydas)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Cmyd_10005916 T134287_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF653
M08248_2.00 		Homo sapiens
NWTTHNYDHCYKCCGACWNHWAWD
HWTWDNWGTCGGMRGDHRNDAAWN		 ChIP-seq
Najafabadi et al.(2015b)
ZNF653 		0.811 0.965
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cmyd_10005916 C2H2 ZF 355 380
Cmyd_10005916 C2H2 ZF 386 410
Cmyd_10005916 C2H2 ZF 416 438
Cmyd_10005916 C2H2 ZF 444 466
Cmyd_10005916 C2H2 ZF 474 497

Links

Other C2H2 ZF family TFs
Other Chelonia mydas TFs

34 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CaO19.13396 Candida albicans CaO19.13396 N
CaO19.5975 Candida albicans CaO19.5975 N
CD36_85020 Candida dubliniensis CD36_85020 N
PGUG_01822 Candida guilliermondii PGUG_01822 N
G210_0176 Candida maltosa G210_0176 N
CORT_0C04880 Candida orthopsilosis CORT_0C04880 N
CPAG_05121 Candida parapsilosis CPAG_05121 N
CANTEDRAFT_126106 Candida tenuis CANTEDRAFT_126106 N
DEHA2B13904g Debaryomyces hansenii DEHA2B13904g N
PGUG_01822 Meyerozyma guilliermondii PGUG_01822 N
GNLVRS01_PISO0D02005g Millerozyma farinosa GNLVRS01_PISO0D02005g N
e_gwh1.8.1.646.1 Pichia stipitis e_gwh1.8.1.646.1 N
PICST_50873 Scheffersomyces stipitis PICST_50873 N
SPAPADRAFT_61969 Spathaspora passalidarum SPAPADRAFT_61969 N