Cmyd_10016351 (Chelonia mydas)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Cmyd_10016351 T134425_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZBTB18
M02916_2.00 		Homo sapiens
VMACATCTGGAWN
NWTCCAGATGTKB		 SELEX
Jolma et al.(2013)
ZNF238_1 		0.827 1.000
ZBTB18
M02917_2.00 		Homo sapiens
NMACATCTGGMHN
NDKCCAGATGTKN		 SELEX
Jolma et al.(2013)
ZNF238_2 		0.827 1.000
ZBTB18
M04585_2.00 		Homo sapiens
NMACATCTGGMHN
NDKCCAGATGTKN		 SELEX
Yin et al.(2017)
ZBTB18_eDBD_HT-SELEX 		0.827 1.000
ZBTB18
M08350_2.00 		Homo sapiens
MRCAKCTGG
CCAGMTGYK		 ChIP-seq
Schmitges et al.(2016)
Q99592_2-4.RCADE 		0.827 1.000
ZBTB18
M08257_2.00 		Homo sapiens
NMGCAGCTGCKB
VMGCAGCTGCKN		 ChIP-seq
Najafabadi et al.(2015b)
ZNF238 		0.827 1.000
ZBTB18
M08928_2.00 		Homo sapiens
VMRCAKCTGGV
BCCAGMTGYKB		 Misc
Kulakovskiy et al.(2013)
ZBT18_HUMAN.H11MO.0.C 		0.827 1.000
ZBTB18
M10282_2.00 		Homo sapiens
NNMACATCTGGM
KCCAGATGTKNN		 Transfac
Matys et al.(2006)
V$RP58_01 		0.827 1.000
ZBTB18
M10283_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RP58_Q3 		0.827 1.000
ZBTB18
M04586_2.00 		Homo sapiens
NMACATCTGBHNN
NNDVCAGATGTKN		 SELEX
Yin et al.(2017)
ZBTB18_eDBD_Methyl-HT-SELEX 		0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cmyd_10016351 C2H2 ZF 453 475
Cmyd_10016351 C2H2 ZF 494 515
Cmyd_10016351 C2H2 ZF 521 543
Cmyd_10016351 C2H2 ZF 549 572

Links

Other C2H2 ZF family TFs
Other Chelonia mydas TFs

72 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000012353 Ailuropoda melanoleuca ENSAMEG00000012353 I
ENSAMEG00000013103 Ailuropoda melanoleuca ENSAMEG00000013103 I
ENSAMEG00000017117 Ailuropoda melanoleuca ENSAMEG00000017117 I
ENSAMEG00000018238 Ailuropoda melanoleuca ENSAMEG00000018238 I
Alligator_sinensis_CCG002397.1 Alligator sinensis Alligator_sinensis_CCG002397.1 I
Alligator_sinensis_CCG004214.1 Alligator sinensis Alligator_sinensis_CCG004214.1 I
Alligator_sinensis_CCG020422.1 Alligator sinensis Alligator_sinensis_CCG020422.1 I
ENSAPLG00000010269 Anas platyrhynchos ENSAPLG00000010269 I
ENSAPLG00000011965 Anas platyrhynchos ENSAPLG00000011965 I
ENSAPLG00000012143 Anas platyrhynchos ENSAPLG00000012143 I
TFEC Anolis carolinensis ENSACAG00000006672 I
MITF Anolis carolinensis ENSACAG00000013586 I
TFE3 Anolis carolinensis ENSACAG00000022140 I
Afo_R002063 Aptenodytes forsteri Afo_R002063 I
Afo_R003542 Aptenodytes forsteri Afo_R003542 I
Afo_R011673 Aptenodytes forsteri Afo_R011673 I
ENSAMXG00000020781 Astyanax mexicanus ENSAMXG00000020781 I
ENSAMXG00000021026 Astyanax mexicanus ENSAMXG00000021026 I
ENSBTAP00000053693-D1 Bos grunniens ENSBTAP00000053693-D1 I
ENSP00000265440-D1 Bos grunniens ENSP00000265440-D1 I
ENSP00000338360-D1 Bos grunniens ENSP00000338360-D1 I
ENSP00000343948-D1 Bos grunniens ENSP00000343948-D1 I
MITF Bos taurus ENSBTAG00000006679 I
TFE3 Bos taurus ENSBTAG00000008523 I
TFEB Bos taurus ENSBTAG00000012384 I
TFEC Bos taurus ENSBTAG00000014228 I
e_gw.492.5.1 Branchiostoma floridae e_gw.492.5.1 I
Brh_R005039 Buceros rhinoceros Brh_R005039 I
Brh_R009446 Buceros rhinoceros Brh_R009446 I
Brh_R012392 Buceros rhinoceros Brh_R012392 I
TFEB Callithrix jacchus ENSCJAG00000004199 I
TFEC Callithrix jacchus ENSCJAG00000005199 I
MITF Callithrix jacchus ENSCJAG00000013260 I
Aan_R002066 Calypte anna Aan_R002066 I
Aan_R003797 Calypte anna Aan_R003797 I
Aan_R007225 Calypte anna Aan_R007225 I
TFEB Canis familiaris ENSCAFG00000001599 I
TFEC Canis familiaris ENSCAFG00000003397 I
MITF Canis familiaris ENSCAFG00000006496 I
TFE3 Canis familiaris ENSCAFG00000015765 I
TFEB Cavia porcellus ENSCPOG00000008027 I
TFEC Cavia porcellus ENSCPOG00000012369 I
TFE3 Cavia porcellus ENSCPOG00000012410 I
MITF Cavia porcellus ENSCPOG00000014963 I
Cmyd_10010632 Chelonia mydas Cmyd_10010632 I
ENSCSAG00000010942 Chlorocebus sabaeus ENSCSAG00000010942 I
ENSCSAG00000011274 Chlorocebus sabaeus ENSCSAG00000011274 I
ENSCSAG00000011595 Chlorocebus sabaeus ENSCSAG00000011595 I
ENSCSAG00000013021 Chlorocebus sabaeus ENSCSAG00000013021 I
TFEC Choloepus hoffmanni ENSCHOG00000001149 I
mitfa Danio rerio ENSDARG00000003732 I
tfe3b Danio rerio ENSDARG00000019457 I
mitfb Danio rerio ENSDARG00000037833 I
tfec Danio rerio ENSDARG00000098745 I
tfe3a Danio rerio ENSDARG00000098903 I
MITF Dasypus novemcinctus ENSDNOG00000037006 I
TFE3 Dasypus novemcinctus ENSDNOG00000039173 I
ENSDNOG00000045240 Dasypus novemcinctus ENSDNOG00000045240 I
Mitf Dipodomys ordii ENSDORG00000003336 I
Tfec Dipodomys ordii ENSDORG00000004403 I
ENSDORG00000013258 Dipodomys ordii ENSDORG00000013258 I
MITF Equus caballus ENSECAG00000005360 I
TFEC Equus caballus ENSECAG00000013937 I
TFEB Equus caballus ENSECAG00000019762 I
TFE3 Equus caballus ENSECAG00000020642 I
MITF Erinaceus europaeus ENSEEUG00000005163 I
TFE3 Felis catus ENSFCAG00000002574 I
TFEB Felis catus ENSFCAG00000011521 I
MITF Felis catus ENSFCAG00000024419 I
TFEC Felis catus ENSFCAG00000027627 I
ENSFALG00000003097 Ficedula albicollis ENSFALG00000003097 I
ENSFALG00000010129 Ficedula albicollis ENSFALG00000010129 I
ENSFALG00000013383 Ficedula albicollis ENSFALG00000013383 I
ENSGMOG00000007421 Gadus morhua ENSGMOG00000007421 I
ENSGMOG00000009209 Gadus morhua ENSGMOG00000009209 I
ENSGMOG00000010175 Gadus morhua ENSGMOG00000010175 I
ENSGMOG00000018115 Gadus morhua ENSGMOG00000018115 I
ENSGALG00000003404 Gallus gallus ENSGALG00000003404 I
ENSGALG00000007679 Gallus gallus ENSGALG00000007679 I
ENSGALG00000009411 Gallus gallus ENSGALG00000009411 I
mitfb Gasterosteus aculeatus ENSGACG00000003425 I
tfe3b Gasterosteus aculeatus ENSGACG00000010355 I
mitfa Gasterosteus aculeatus ENSGACG00000011875 I
tfec Gasterosteus aculeatus ENSGACG00000018910 I
Gfo_R002984 Geospiza fortis Gfo_R002984 I
Gfo_R005766 Geospiza fortis Gfo_R005766 I
Gfo_R014572 Geospiza fortis Gfo_R014572 I
TFEB Gorilla gorilla ENSGGOG00000002683 I
TFEC Gorilla gorilla ENSGGOG00000009901 I
TFE3 Gorilla gorilla ENSGGOG00000014023 I
MITF Gorilla gorilla ENSGGOG00000024338 I
TFE3 Homo sapiens ENSG00000068323 D
TFEC Homo sapiens ENSG00000105967 D
TFEB Homo sapiens ENSG00000112561 D
MITF Homo sapiens ENSG00000187098 D
ENSSTOG00000001224 Ictidomys tridecemlineatus ENSSTOG00000001224 I
ENSSTOG00000014237 Ictidomys tridecemlineatus ENSSTOG00000014237 I
ENSSTOG00000015338 Ictidomys tridecemlineatus ENSSTOG00000015338 I
ENSLACG00000008018 Latimeria chalumnae ENSLACG00000008018 I
ENSLACG00000011547 Latimeria chalumnae ENSLACG00000011547 I
ENSLOCG00000010058 Lepisosteus oculatus ENSLOCG00000010058 I
ENSLOCG00000014691 Lepisosteus oculatus ENSLOCG00000014691 I
ENSLOCG00000015941 Lepisosteus oculatus ENSLOCG00000015941 I
TFEB Loxodonta africana ENSLAFG00000003059 I
TFEC Loxodonta africana ENSLAFG00000017267 I
MITF Loxodonta africana ENSLAFG00000023153 I
TFE3 Loxodonta africana ENSLAFG00000025585 I
ENSMMUP00000030934 Macaca fascicularis ENSMMUP00000030934 I
ENSP00000265440 Macaca fascicularis ENSP00000265440 I
ENSP00000343948 Macaca fascicularis ENSP00000343948 I
ENSP00000391803 Macaca fascicularis ENSP00000391803 I
MITF Macaca mulatta ENSMMUG00000002100 I
TFEB Macaca mulatta ENSMMUG00000004690 I
ENSMMUG00000016347 Macaca mulatta ENSMMUG00000016347 I
TFE3 Macaca mulatta ENSMMUG00000023494 I
ENSMEUG00000009307 Macropus eugenii ENSMEUG00000009307 I
TFEB Meleagris gallopavo ENSMGAG00000006159 I
TFEC Meleagris gallopavo ENSMGAG00000008979 I
MITF Meleagris gallopavo ENSMGAG00000009507 I
ENSMICG00000002894 Microcebus murinus ENSMICG00000002894 I
TFEC Microcebus murinus ENSMICG00000006995 I
TFE3 Microcebus murinus ENSMICG00000009708 I
TFEB Microcebus murinus ENSMICG00000015674 I
MITF Monodelphis domestica ENSMODG00000003754 I
TFE3 Monodelphis domestica ENSMODG00000009925 I
ENSMODG00000015845 Monodelphis domestica ENSMODG00000015845 I
ENSMPUG00000007248 Mustela putorius furo ENSMPUG00000007248 I
ENSMPUG00000013594 Mustela putorius furo ENSMPUG00000013594 I
ENSMPUG00000013794 Mustela putorius furo ENSMPUG00000013794 I
ENSMPUG00000016972 Mustela putorius furo ENSMPUG00000016972 I
Tfe3 Mus musculus ENSMUSG00000000134 D
Tfeb Mus musculus ENSMUSG00000023990 D
Tfec Mus musculus ENSMUSG00000029553 D
Mitf Mus musculus ENSMUSG00000035158 D
Myotis_brandtii_Mitf_10022588 Myotis brandtii Myotis_brandtii_Mitf_10022588 I
Myotis_brandtii_TFE3_10010865 Myotis brandtii Myotis_brandtii_TFE3_10010865 I
Myotis_brandtii_TFEB_10015405 Myotis brandtii Myotis_brandtii_TFEB_10015405 I
TFEB Myotis lucifugus ENSMLUG00000000232 I
MITF Myotis lucifugus ENSMLUG00000002587 I
TFE3 Myotis lucifugus ENSMLUG00000030217 I
ENSNLEG00000002357 Nomascus leucogenys ENSNLEG00000002357 I
ENSNLEG00000004906 Nomascus leucogenys ENSNLEG00000004906 I
ENSNLEG00000007963 Nomascus leucogenys ENSNLEG00000007963 I
ENSNLEG00000011480 Nomascus leucogenys ENSNLEG00000011480 I
TFE3 Ochotona princeps ENSOPRG00000007735 I
ENSONIG00000000820 Oreochromis niloticus ENSONIG00000000820 I
ENSONIG00000016803 Oreochromis niloticus ENSONIG00000016803 I
ENSONIG00000016952 Oreochromis niloticus ENSONIG00000016952 I
ENSONIG00000020270 Oreochromis niloticus ENSONIG00000020270 I
ENSONIG00000020291 Oreochromis niloticus ENSONIG00000020291 I
ENSOANG00000012406 Ornithorhynchus anatinus ENSOANG00000012406 I
TFE3 Ornithorhynchus anatinus ENSOANG00000013574 I
TFEC Ornithorhynchus anatinus ENSOANG00000014094 I
TFEB Ornithorhynchus anatinus ENSOANG00000015438 I
MITF Oryctolagus cuniculus ENSOCUG00000002190 I
TFEC Oryctolagus cuniculus ENSOCUG00000006292 I
TFE3 Oryctolagus cuniculus ENSOCUG00000015807 I
TFEB Oryctolagus cuniculus ENSOCUG00000027474 I
mitfa Oryzias latipes ENSORLG00000003123 I
tfec Oryzias latipes ENSORLG00000010461 I
mitfb Oryzias latipes ENSORLG00000013461 I
tfe3b Oryzias latipes ENSORLG00000014134 I
MITF Otolemur garnettii ENSOGAG00000000043 I
TFEC Otolemur garnettii ENSOGAG00000010066 I
TFEB Otolemur garnettii ENSOGAG00000010116 I
TFE3 Otolemur garnettii ENSOGAG00000031330 I
ENSOARG00000001668 Ovis aries ENSOARG00000001668 I
ENSOARG00000002322 Ovis aries ENSOARG00000002322 I
ENSOARG00000009833 Ovis aries ENSOARG00000009833 I
ENSOARG00000011157 Ovis aries ENSOARG00000011157 I
MITF Pan troglodytes ENSPTRG00000015100 I
TFEB Pan troglodytes ENSPTRG00000018157 I
TFEC Pan troglodytes ENSPTRG00000019610 I
ENSPANG00000009713 Papio anubis ENSPANG00000009713 I
ENSPANG00000011565 Papio anubis ENSPANG00000011565 I
ENSPANG00000013676 Papio anubis ENSPANG00000013676 I
ENSPANG00000022367 Papio anubis ENSPANG00000022367 I
PHUM610100 Pediculus humanus PHUM610100 I
ENSPSIG00000010995 Pelodiscus sinensis ENSPSIG00000010995 I
ENSPSIG00000012120 Pelodiscus sinensis ENSPSIG00000012120 I
ENSPSIG00000015144 Pelodiscus sinensis ENSPSIG00000015144 I
ENSPMAG00000001002 Petromyzon marinus ENSPMAG00000001002 I
ENSPMAG00000004927 Petromyzon marinus ENSPMAG00000004927 I
ENSPMAG00000008619 Petromyzon marinus ENSPMAG00000008619 I
ENSPFOG00000001499 Poecilia formosa ENSPFOG00000001499 I
ENSPFOG00000006677 Poecilia formosa ENSPFOG00000006677 I
ENSPFOG00000007171 Poecilia formosa ENSPFOG00000007171 I
ENSPFOG00000014522 Poecilia formosa ENSPFOG00000014522 I
Pvit_00330 Pogona vitticeps Pvit_00330 I
Pvit_01233 Pogona vitticeps Pvit_01233 I
Pvit_16445 Pogona vitticeps Pvit_16445 I
ENSPPYG00000013725 Pongo abelii ENSPPYG00000013725 I
ENSPPYG00000016599 Pongo abelii ENSPPYG00000016599 I
ENSPPYG00000017928 Pongo abelii ENSPPYG00000017928 I
ENSPPYG00000029376 Pongo abelii ENSPPYG00000029376 I
TFE3 Procavia capensis ENSPCAG00000003945 I
TFEB Pteropus vampyrus ENSPVAG00000007581 I
TFE3 Pteropus vampyrus ENSPVAG00000009435 I
Mitf Rattus norvegicus ENSRNOG00000008658 I
Tfe3 Rattus norvegicus ENSRNOG00000009605 I
Tfeb Rattus norvegicus ENSRNOG00000014666 I
Tfec Rattus norvegicus ENSRNOG00000061595 I
ENSSHAG00000003327 Sarcophilus harrisii ENSSHAG00000003327 I
ENSSHAG00000009705 Sarcophilus harrisii ENSSHAG00000009705 I
ENSSHAG00000012198 Sarcophilus harrisii ENSSHAG00000012198 I
ENSSHAG00000017522 Sarcophilus harrisii ENSSHAG00000017522 I
TFE3 Sorex araneus ENSSARG00000000644 I
TFEB Sus scrofa ENSSSCG00000001621 I
TFE3 Sus scrofa ENSSSCG00000012287 I
ENSSSCG00000016637 Sus scrofa ENSSSCG00000016637 I
TFEC Taeniopygia guttata ENSTGUG00000005289 I
MITF Taeniopygia guttata ENSTGUG00000009847 I
ENSTGUG00000017433 Taeniopygia guttata ENSTGUG00000017433 I
mitfa Takifugu rubripes ENSTRUG00000001600 I
tfe3a Takifugu rubripes ENSTRUG00000005584 I
mitfb Takifugu rubripes ENSTRUG00000012080 I
tfe3b Takifugu rubripes ENSTRUG00000013198 I
ENSTSYG00000008234 Tarsius syrichta ENSTSYG00000008234 I
ENSTSYG00000011324 Tarsius syrichta ENSTSYG00000011324 I
tfe3b Tetraodon nigroviridis ENSTNIG00000007324 I
mitfa Tetraodon nigroviridis ENSTNIG00000007360 I
mitfb Tetraodon nigroviridis ENSTNIG00000012564 I
tfec Tetraodon nigroviridis ENSTNIG00000018518 I
ENSTNIG00000019469 Tetraodon nigroviridis ENSTNIG00000019469 I
MITF Tupaia belangeri ENSTBEG00000017713 I
TFEC Tursiops truncatus ENSTTRG00000005875 I
MITF Tursiops truncatus ENSTTRG00000007072 I
TFE3 Tursiops truncatus ENSTTRG00000009064 I
ENSTTRG00000016385 Tursiops truncatus ENSTTRG00000016385 I
Tal_R000725 Tyto alba Tal_R000725 I
Tal_R001329 Tyto alba Tal_R001329 I
Tal_R006591 Tyto alba Tal_R006591 I
TFEC Vicugna pacos ENSVPAG00000005459 I
tfe3.S Xenopus laevis XB-GENE-5918226 I
mitf.L Xenopus laevis XB-GENE-6252679 I
mitf.S Xenopus laevis XB-GENE-6464338 I
mitf Xenopus tropicalis XB-GENE-484962 I
ENSXMAG00000002200 Xiphophorus maculatus ENSXMAG00000002200 I
ENSXMAG00000003547 Xiphophorus maculatus ENSXMAG00000003547 I
ENSXMAG00000007656 Xiphophorus maculatus ENSXMAG00000007656 I
ENSXMAG00000009146 Xiphophorus maculatus ENSXMAG00000009146 I
ENSXMAG00000016472 Xiphophorus maculatus ENSXMAG00000016472 I