Gfo_R008521 (Geospiza fortis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Gfo_R008521 T135770_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Gfo_R008521 C2H2 ZF 388 410
Gfo_R008521 C2H2 ZF 419 441
Gfo_R008521 C2H2 ZF 481 504
Gfo_R008521 C2H2 ZF 510 532
Gfo_R008521 C2H2 ZF 538 561
Gfo_R008521 C2H2 ZF 567 588
Gfo_R008521 C2H2 ZF 595 618
Gfo_R008521 C2H2 ZF 624 646
Gfo_R008521 C2H2 ZF 652 675
Gfo_R008521 C2H2 ZF 681 703
Gfo_R008521 C2H2 ZF 709 732
Gfo_R008521 C2H2 ZF 738 761

Links

Other C2H2 ZF family TFs
Other Geospiza fortis TFs

13 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Alligator_sinensis_CCG016799.1 Alligator sinensis Alligator_sinensis_CCG016799.1 N 0.795
ENSAPLG00000007311 Anas platyrhynchos ENSAPLG00000007311 N 0.804
ZNF711 Anolis carolinensis ENSACAG00000014034 N 0.788
Afo_R014155 Aptenodytes forsteri Afo_R014155 N 0.826
Brh_R000426 Buceros rhinoceros Brh_R000426 N 0.826
Aan_R004750 Calypte anna Aan_R004750 N 0.826
ENSFALG00000004005 Ficedula albicollis ENSFALG00000004005 N 0.826
ZNF711 Monodelphis domestica ENSMODG00000014346 N 0.780
Ogr04055 Ophisaurus gracilis Ogr04055 N 0.807
ENSPSIG00000003246 Pelodiscus sinensis ENSPSIG00000003246 N 0.826
Pvit_08921 Pogona vitticeps Pvit_08921 N 0.794
ZNF711 Taeniopygia guttata ENSTGUG00000002466 N 0.827
Tal_R004476 Tyto alba Tal_R004476 N 0.826