CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pvit_12232
(
Pogona vitticeps
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Pvit_12232
T137317_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pvit_12232
C2H2 ZF
81
103
YECGICGKKYKYYNCFQTHVRAH
Pvit_12232
C2H2 ZF
122
144
YTCDICGKKYKYYSCFQEHRDLH
Pvit_12232
C2H2 ZF
178
200
YTCEFCGKQYKYYTPYQEHVALH
Links
Other
C2H2 ZF
family TFs
Other
Pogona vitticeps
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ZNF618
Anolis carolinensis
ENSACAG00000001132
N
0.827
Cmyd_10020374
Chelonia mydas
Cmyd_10020374
N
0.827
ZNF618
Loxodonta africana
ENSLAFG00000011286
N
0.827
ZNF618
Myotis lucifugus
ENSMLUG00000028634
N
0.827
Ogr04586
Ophisaurus gracilis
Ogr04586
N
0.827
znf618.S
Xenopus laevis
XB-GENE-6251558
N
0.807
znf618
Xenopus tropicalis
XB-GENE-6065985
N
0.823