Tal_R003136 (Tyto alba)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Tal_R003136 T137605_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PLAG1
M06465_2.00 		Homo sapiens
CCCCCKWDGGCCCC
GGGGCCHWMGGGGG		 B1H
Mathelier et al.(2014)
MA0163.1 		0.817 0.981
PLAG1
M10286_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PLAG1_01 		0.817 0.981
PLAG1
M10287_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PLAG1_02 		0.817 0.981
PLAG1
M10288_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PLAG1_08 		0.817 0.981
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Tal_R003136 C2H2 ZF 34 56
Tal_R003136 C2H2 ZF 62 86
Tal_R003136 C2H2 ZF 92 114
Tal_R003136 C2H2 ZF 121 143
Tal_R003136 C2H2 ZF 150 172
Tal_R003136 C2H2 ZF 185 207
Tal_R003136 C2H2 ZF 213 236

Links

Other C2H2 ZF family TFs
Other Tyto alba TFs

54 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
gw1.165.16.1 Phytophthora capsici gw1.165.16.1 N
PITG_15785 Phytophthora infestans PITG_15785 N
F443_20988 Phytophthora parasitica F443_20988 N
Physo130750 Phytophthora sojae Physo130750 N
maker-par_contig_2046-fgenesh-gene-0.1 Pythium arrhenomanes maker-par_contig_2046-fgenesh-gene-0.1 N
maker-pve_contig_67-fgenesh-gene-0.24 Pythium vexans maker-pve_contig_67-fgenesh-gene-0.24 N