CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh2_pg.C_10050003
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_fgenesh2_pg.C_10050003
T138572_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh2_pg.C_10050003
C2H2 ZF
3
26
HVCEICDREFDRAFNLERHLERKH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
27 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
estExt_fgenesh2_pg.C_960136
Branchiostoma floridae
estExt_fgenesh2_pg.C_960136
N
0.817
fgenesh2_pg.scaffold_72000003
Branchiostoma floridae
fgenesh2_pg.scaffold_72000003
N
0.817
fgenesh2_pg.scaffold_624000032
Branchiostoma floridae
fgenesh2_pg.scaffold_624000032
N
0.827
fgenesh2_pg.scaffold_58000023
Branchiostoma floridae
fgenesh2_pg.scaffold_58000023
N
0.827
fgenesh2_pg.scaffold_55000124
Branchiostoma floridae
fgenesh2_pg.scaffold_55000124
N
0.817
fgenesh2_pg.scaffold_55000119
Branchiostoma floridae
fgenesh2_pg.scaffold_55000119
N
0.827
fgenesh2_pg.scaffold_440000023
Branchiostoma floridae
fgenesh2_pg.scaffold_440000023
N
0.786
fgenesh2_pg.scaffold_354000015
Branchiostoma floridae
fgenesh2_pg.scaffold_354000015
N
0.769
fgenesh2_pg.scaffold_354000013
Branchiostoma floridae
fgenesh2_pg.scaffold_354000013
N
0.778
fgenesh2_pg.scaffold_32000086
Branchiostoma floridae
fgenesh2_pg.scaffold_32000086
N
0.827
fgenesh2_pg.scaffold_32000031
Branchiostoma floridae
fgenesh2_pg.scaffold_32000031
N
0.827
fgenesh2_pg.scaffold_308000052
Branchiostoma floridae
fgenesh2_pg.scaffold_308000052
N
0.827
fgenesh2_pg.scaffold_268000051
Branchiostoma floridae
fgenesh2_pg.scaffold_268000051
N
0.758
fgenesh2_pg.scaffold_1639000001
Branchiostoma floridae
fgenesh2_pg.scaffold_1639000001
N
0.817
estExt_fgenesh2_pg.C_10050001
Branchiostoma floridae
estExt_fgenesh2_pg.C_10050001
N
0.825
estExt_fgenesh2_pg.C_750143
Branchiostoma floridae
estExt_fgenesh2_pg.C_750143
N
0.817
estExt_fgenesh2_pg.C_7360007
Branchiostoma floridae
estExt_fgenesh2_pg.C_7360007
N
0.827
estExt_fgenesh2_pg.C_7160018
Branchiostoma floridae
estExt_fgenesh2_pg.C_7160018
N
0.817
estExt_fgenesh2_pg.C_5860001
Branchiostoma floridae
estExt_fgenesh2_pg.C_5860001
N
0.827
estExt_fgenesh2_pg.C_5580012
Branchiostoma floridae
estExt_fgenesh2_pg.C_5580012
N
0.827
estExt_fgenesh2_pg.C_520015
Branchiostoma floridae
estExt_fgenesh2_pg.C_520015
N
0.817
estExt_fgenesh2_pg.C_460129
Branchiostoma floridae
estExt_fgenesh2_pg.C_460129
N
0.827
estExt_fgenesh2_pg.C_2150032
Branchiostoma floridae
estExt_fgenesh2_pg.C_2150032
N
0.817
estExt_fgenesh2_pg.C_160025
Branchiostoma floridae
estExt_fgenesh2_pg.C_160025
N
0.827
estExt_fgenesh2_pg.C_1360008
Branchiostoma floridae
estExt_fgenesh2_pg.C_1360008
N
0.827
estExt_fgenesh2_pg.C_1010105
Branchiostoma floridae
estExt_fgenesh2_pg.C_1010105
N
0.817
estExt_fgenesh2_pg.C_10050002
Branchiostoma floridae
estExt_fgenesh2_pg.C_10050002
N
0.827