CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Aquca_011_00361
(
Aquilegia coerulea
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Aquca_011_00361
T142537_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Aquca_011_00361.1
C2H2 ZF
1420
1443
YQCDLDGCTMGFSSKQELVLHKKN
Aquca_011_00361.1
C2H2 ZF
1444
1467
ICSVKGCGKKFFSHKYLVQHRRVH
Aquca_011_00361.1
C2H2 ZF
1503
1529
YVCREKGCGQTFRFVSDFSRHKRKTGH
Links
Other
C2H2 ZF
family TFs
Other
Aquilegia coerulea
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
evm.TU.supercontig_4.49
Carica papaya
evm.TU.supercontig_4.49
N
0.798
Ca_08787
Cicer arietinum
Ca_08787
N
0.767
Ciclev10018473m.g
Citrus clementina
Ciclev10018473m.g
N
0.803
Cucsa.391680
Cucumis sativus
Cucsa.391680
N
0.784
Eucgr.K02763
Eucalyptus grandis
Eucgr.K02763
N
0.759
GLYMA06G18300
Glycine max
GLYMA06G18300
N
0.757
Gorai.006G270100
Gossypium raimondii
Gorai.006G270100
N
0.819
POPTR_0012s09390
Populus trichocarpa
POPTR_0012s09390
N
0.801
Solyc03g111590.2
Solanum lycopersicum
Solyc03g111590.2
N
0.759
PGSC0003DMG400015167
Solanum tuberosum
PGSC0003DMG400015167
N
0.759
TCM_014549
Theobroma cacao
TCM_014549
N
0.799