Ciclev10000850m.g (Citrus clementina)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Ciclev10000850m.g T142753_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
STOP1
M06801_2.00 		Arabidopsis thaliana
CCTBCMCCAGDTRHHMCYY
RRGKDDYAHCTGGKGVAGG		 Dap-seq
OMalley et al.(2016)
STOP1_col_a 		0.803 0.933
STOP1
M06802_2.00 		Arabidopsis thaliana
RCCTNCMCCRGWWRN
NYWWCYGGKGNAGGY		 Dap-seq
OMalley et al.(2016)
STOP1_colamp_a 		0.803 0.933
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ciclev10000850m C2H2 ZF 358 380
Ciclev10000850m C2H2 ZF 379 410

Links

Other C2H2 ZF family TFs
Other Citrus clementina TFs

64 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000001273 Ailuropoda melanoleuca ENSAMEG00000001273 I 0.000
Alligator_sinensis_CCG009047.1 Alligator sinensis Alligator_sinensis_CCG009047.1 I 0.000
ENSAPLG00000006256 Anas platyrhynchos ENSAPLG00000006256 I 0.000
ZNF276 Anolis carolinensis ENSACAG00000008103 I 0.000
Afo_R007523 Aptenodytes forsteri Afo_R007523 I 0.000
ENSAMXG00000015046 Astyanax mexicanus ENSAMXG00000015046 I 0.000
ENSP00000415836-D1 Bos grunniens ENSP00000415836-D1 I 0.000
ZNF276 Bos taurus ENSBTAG00000001904 I 0.000
Brh_R003401 Buceros rhinoceros Brh_R003401 I 0.000
ZNF276 Callithrix jacchus ENSCJAG00000010721 I 0.000
Aan_R009185 Calypte anna Aan_R009185 I 0.000
ZNF276 Canis familiaris ENSCAFG00000019816 I 0.000
ZNF276 Cavia porcellus ENSCPOG00000002334 I 0.000
Cmyd_10016754 Chelonia mydas Cmyd_10016754 I 0.000
ENSCSAG00000002787 Chlorocebus sabaeus ENSCSAG00000002787 I 0.000
ZNF276 Dasypus novemcinctus ENSDNOG00000001856 I 0.000
ENSETEG00000007978 Echinops telfairi ENSETEG00000007978 I 0.000
ZNF276 Equus caballus ENSECAG00000019563 I 0.000
ENSEEUG00000012574 Erinaceus europaeus ENSEEUG00000012574 I 0.000
ZNF276 Felis catus ENSFCAG00000003794 I 0.000
ENSFALG00000003070 Ficedula albicollis ENSFALG00000003070 I 0.000
ENSGMOG00000003784 Gadus morhua ENSGMOG00000003784 I 0.000
ZNF276 Gallus gallus ENSGALG00000000513 I 0.000
ZNF276 Gasterosteus aculeatus ENSGACG00000002104 I 0.000
Gfo_R000535 Geospiza fortis Gfo_R000535 I 0.000
ZNF276 Gorilla gorilla ENSGGOG00000010960 I 0.000
ZNF276 Homo sapiens ENSG00000158805 D 0.000
ENSSTOG00000013982 Ictidomys tridecemlineatus ENSSTOG00000013982 I 0.000
ENSLOCG00000002928 Lepisosteus oculatus ENSLOCG00000002928 I 0.000
ZNF276 Loxodonta africana ENSLAFG00000018198 I 0.000
ENSMMUP00000003371 Macaca fascicularis ENSMMUP00000003371 I 0.000
ZNF276 Macaca mulatta ENSMMUG00000002506 I 0.000
ENSMEUG00000001901 Macropus eugenii ENSMEUG00000001901 I 0.000
ZNF276 Meleagris gallopavo ENSMGAG00000008195 I 0.000
ZNF276 Microcebus murinus ENSMICG00000003291 I 0.000
ZNF276 Monodelphis domestica ENSMODG00000003479 I 0.000
ENSMPUG00000007237 Mustela putorius furo ENSMPUG00000007237 I 0.000
Zfp276 Mus musculus ENSMUSG00000001065 I 0.000
Myotis_brandtii_ZNF276_10003797 Myotis brandtii Myotis_brandtii_ZNF276_10003797 I 0.000
ZNF276 Myotis lucifugus ENSMLUG00000013641 I 0.000
ENSNLEG00000015731 Nomascus leucogenys ENSNLEG00000015731 I 0.000
ZNF276 Ochotona princeps ENSOPRG00000016172 I 0.000
Ogr16798 Ophisaurus gracilis Ogr16798 I 0.000
ENSONIG00000010959 Oreochromis niloticus ENSONIG00000010959 I 0.000
ZNF276 Ornithorhynchus anatinus ENSOANG00000004837 I 0.000
ZNF276 Oryctolagus cuniculus ENSOCUG00000008960 I 0.000
ZNF276 Oryzias latipes ENSORLG00000015289 I 0.000
ZNF276 Otolemur garnettii ENSOGAG00000004891 I 0.000
ENSOARG00000014354 Ovis aries ENSOARG00000014354 I 0.000
ZNF276 Pan troglodytes ENSPTRG00000008487 I 0.000
ENSPANG00000022228 Papio anubis ENSPANG00000022228 I 0.000
ENSPSIG00000009997 Pelodiscus sinensis ENSPSIG00000009997 I 0.000
ENSPFOG00000011742 Poecilia formosa ENSPFOG00000011742 I 0.000
Pvit_16300 Pogona vitticeps Pvit_16300 I 0.000
ENSPPYG00000007673 Pongo abelii ENSPPYG00000007673 I 0.000
ZNF276 Procavia capensis ENSPCAG00000001610 I 0.000
Zfp276 Rattus norvegicus ENSRNOG00000016631 I 0.000
ENSSHAG00000006045 Sarcophilus harrisii ENSSHAG00000006045 I 0.000
ZNF276 Sorex araneus ENSSARG00000003731 I 0.000
ZNF276 Sus scrofa ENSSSCG00000029228 I 0.000
ZNF276 Taeniopygia guttata ENSTGUG00000007961 I 0.000
ZNF276 Takifugu rubripes ENSTRUG00000005087 I 0.000
ZNF276 Tetraodon nigroviridis ENSTNIG00000008839 I 0.000
ZNF276 Tursiops truncatus ENSTTRG00000004416 I 0.000
znf276.S Xenopus laevis XB-GENE-983672 I 0.000
znf276 Xenopus tropicalis XB-GENE-983669 I 0.000
ENSXMAG00000002903 Xiphophorus maculatus ENSXMAG00000002903 I 0.000