CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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evm.TU.supercontig_4.49
(
Carica papaya
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
evm.TU.supercontig_4.49
T142917_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
evm.model.supercontig_4.49
C2H2 ZF
1419
1442
YLCDMEGCTMSFVSKQELVLHKRN
evm.model.supercontig_4.49
C2H2 ZF
1443
1466
ICPVKGCGKKFFSHKYLVQHRRVH
evm.model.supercontig_4.49
C2H2 ZF
1502
1528
YVCAEAGCGQTFRFVSDFSRHKRKTGH
Links
Other
C2H2 ZF
family TFs
Other
Carica papaya
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GSMUA_Achr5G15570_001
Musa acuminata
GSMUA_Achr5G15570_001
N
estExt_Genewise1.C_1840020
Physcomitrella patens
estExt_Genewise1.C_1840020
N
estExt_gwp_gw1.C_1340024
Physcomitrella patens
estExt_gwp_gw1.C_1340024
N
gw1.10.155.1
Physcomitrella patens
gw1.10.155.1
N
gw1.56.82.1
Physcomitrella patens
gw1.56.82.1
N
gw1.73.66.1
Physcomitrella patens
gw1.73.66.1
N
gw1.9.179.1
Physcomitrella patens
gw1.9.179.1
N
gw1.9.180.1
Physcomitrella patens
gw1.9.180.1
N