gene27486-v1.0-hybrid (Fragaria vesca)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 gene27486-v1.0-hybrid T142979_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
STOP1
M06801_2.00 		Arabidopsis thaliana
CCTBCMCCAGDTRHHMCYY
RRGKDDYAHCTGGKGVAGG		 Dap-seq
OMalley et al.(2016)
STOP1_col_a 		0.827 0.956
STOP1
M06802_2.00 		Arabidopsis thaliana
RCCTNCMCCRGWWRN
NYWWCYGGKGNAGGY		 Dap-seq
OMalley et al.(2016)
STOP1_colamp_a 		0.827 0.956
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
mrna27486.1-v1.0-hybrid C2H2 ZF 356 378
mrna27486.1-v1.0-hybrid C2H2 ZF 377 408

Links

Other C2H2 ZF family TFs
Other Fragaria vesca TFs

78 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACRE_069570 Acremonium chrysogenum ACRE_069570 I
AB00260.1 Alternaria brassicicola AB00260.1 I
AOL_s00075g18 Arthrobotrys oligospora AOL_s00075g18 I
fgenesh1_pm.00866_#_491 Aspergillus carbonarius fgenesh1_pm.00866_#_491 I
ACLA_040020 Aspergillus clavatus CADACLAG00003199 I
CADAFLAG00002414 Aspergillus flavus CADAFLAG00002414 I
CADANGAG00002342 Aspergillus niger CADANGAG00002342 I
CADAORAG00001369 Aspergillus oryzae CADAORAG00001369 I
EURHEDRAFT_516147 Aspergillus ruber EURHEDRAFT_516147 I
ATEG_04171 Aspergillus terreus CADATEAG00009984 D
M437DRAFT_82573 Aureobasidium melanogenum M437DRAFT_82573 I
M438DRAFT_345498 Aureobasidium pullulans M438DRAFT_345498 I
AUEXF2481DRAFT_40998 Aureobasidium subglaciale AUEXF2481DRAFT_40998 I
BBA_00148 Beauveria bassiana BBA_00148 I
COCC4DRAFT_127765 Bipolaris maydis COCC4DRAFT_127765 I
COCMIDRAFT_2266 Bipolaris oryzae COCMIDRAFT_2266 I
COCSADRAFT_125307 Bipolaris sorokiniana COCSADRAFT_125307 I
COCVIDRAFT_88516 Bipolaris victoriae COCVIDRAFT_88516 I
COCCADRAFT_90442 Bipolaris zeicola COCCADRAFT_90442 I
BDDG_04023 Blastomyces dermatitidis BDDG_04023 I
PVAR5_3236 Byssochlamys spectabilis PVAR5_3236 I
CLUG_04271 Candida lusitaniae CLUG_04271 I
A1O1_06861 Capronia coronata A1O1_06861 I
A1O3_10315 Capronia epimyces A1O3_10315 I
PV04_10601 Capronia semiimmersa PV04_10601 I
CTHT_0056810 Chaetomium thermophilum CTHT_0056810 I
G647_08323 Cladophialophora carrionii G647_08323 I
PV07_12240 Cladophialophora immunda PV07_12240 I
A1O5_07631 Cladophialophora psammophila A1O5_07631 I
A1O7_09958 Cladophialophora yegresii A1O7_09958 I
CPUR_03335 Claviceps purpurea CPUR_03335 I
CLUG_04271 Clavispora lusitaniae CLUG_04271 I
CIMG_09634 Coccidioides immitis CIMG_09634 I
CPC735_023880 Coccidioides posadasii CPC735_023880 I
estExt_Genewise1.C_11468 Cochliobolus heterostrophus C5 estExt_Genewise1.C_11468 I
CFIO01_01433 Colletotrichum fioriniae CFIO01_01433 I
CGGC5_5664 Colletotrichum gloeosporioides CGGC5_5664 I
GLRG_04370 Colletotrichum graminicola GLRG_04370 I
CH063_05074 Colletotrichum higginsianum CH063_05074 I
Cob_03876 Colletotrichum orbiculare Cob_03876 I
CSUB01_02498 Colletotrichum sublineola CSUB01_02498 I
CCM_06184 Cordyceps militaris CCM_06184 I
fgenesh1_pm.C_scaffold_5000435 Cryphonectria parasitica fgenesh1_pm.C_scaffold_5000435 I
HMPREF1541_02811 Cyphellophora europaea HMPREF1541_02811 I
H072_1197 Dactylellina haptotyla H072_1197 I
DOTSEDRAFT_142040 Dothistroma septosporum DOTSEDRAFT_142040 I
DRE_07453 Drechslerella stenobrocha DRE_07453 I
EPUS_07220 Endocarpon pusillum EPUS_07220 I
A1O9_06349 Exophiala aquamarina A1O9_06349 I
HMPREF1120_01778 Exophiala dermatitidis HMPREF1120_01778 I
PV10_01019 Exophiala mesophila PV10_01019 I
PV06_07195 Exophiala oligosperma PV06_07195 I
PV11_06012 Exophiala sideris PV11_06012 I
PV08_06661 Exophiala spinifera PV08_06661 I
PV05_02773 Exophiala xenobiotica PV05_02773 I
Z517_12283 Fonsecaea pedrosoi Z517_12283 I
FFUJ_01281 Fusarium fujikuroi FFUJ_01281 I
FGRRES_01100 Fusarium graminearum FGRRES_01100 D
FOXG_00297 Fusarium oxysporum FOXG_00297 I
FPSE_09056 Fusarium pseudograminearum FPSE_09056 I
NechaG98757 Fusarium solani NechaG98757 I
FVEG_01221 Fusarium verticillioides FVEG_01221 I
GGTG_12202 Gaeumannomyces graminis GGTG_12202 I
HCBG_03004 Histoplasma capsulatum HCBG_03004 I
KLLA0_B01584g Kluyveromyces lactis KLLA0_B01584g I
KUCA_T00000773001 Kuraishia capsulata KUCA_T00000773001 I
LEMA_P079180.1 Leptosphaeria maculans LEMA_P079180.1 I
MPH_01872 Macrophomina phaseolina MPH_01872 I
MGG_11712 Magnaporthe oryzae MGG_11712 I
MAPG_09676 Magnaporthe poae MAPG_09676 I
MAC_05257 Metarhizium acridum MAC_05257 I
MAM_06825 Metarhizium album MAM_06825 I
MANI_109748 Metarhizium anisopliae MANI_109748 I
MBR_03692 Metarhizium brunneum MBR_03692 I
MGU_04884 Metarhizium guizhouense MGU_04884 I
MAJ_02218 Metarhizium majus MAJ_02218 I
X797_003774 Metarhizium robertsii X797_003774 I
MCYG_03024 Microsporum canis MCYG_03024 I
MGYG_00197 Microsporum gypseum MGYG_00197 I
fgeneshMC_pg.10_#_259 Mucor circinelloides fgeneshMC_pg.10_#_259 I
estExt_fgenesh1_pg.C_sca_1_chr1_3_00273 Nectria haematococca estExt_fgenesh1_pg.C_sca_1_chr1_3_00273 I
NCU03266 Neurospora crassa NCU03266 D
estExt_fgenesh3_pm.C_70282 Neurospora discreta estExt_fgenesh3_pm.C_70282 I
NEUTE1DRAFT_133183 Neurospora tetrasperma NEUTE1DRAFT_133183 I
F503_07224 Ophiostoma piceae uamh F503_07224 I
PABG_04211 Paracoccidioides brasiliensis PABG_04211 I
PAAG_11867 Paracoccidioides sp lutzii PAAG_11867 I
Pc18g00190 Penicillium chrysogenum Pc18g00190 I
PDIP_75510 Penicillium digitatum PDIP_75510 I
PEX1_077160 Penicillium expansum PEX1_077160 I
PITC_036250 Penicillium italicum PITC_036250 I
PMAA_076490 Penicillium marneffei PMAA_076490 I
PDE_04931 Penicillium oxalicum PDE_04931 I
PCH_Pc18g00190 Penicillium rubens PCH_Pc18g00190 I
U727_00433932271 Penicillium solitum U727_00433932271 I
PFICI_01897 Pestalotiopsis fici PFICI_01897 I
SNOG_10542 Phaeosphaeria nodorum SNOG_10542 I
fgeneshPB_pg.5__518 Phycomyces blakesleeanus fgeneshPB_pg.5__518 I
JL09_g4323 Pichia kudriavzevii JL09_g4323 I
PredSwiss_CON591.1 Pneumocystis carinii PredSwiss_CON591.1 I
PNEG_03146 Pneumocystis murina PNEG_03146 I
PODANS_1_2230 Podospora anserina PODANS_1_2230 I
GMDG_01589 Pseudogymnoascus destructans GMDG_01589 I
V499_00333 Pseudogymnoascus pannorum V499_00333 I
Z518_06261 Rhinocladiella mackenziei Z518_06261 I
RO3G_03673 Rhizopus oryzae RO3G_03673 I
SAPIO_CDS3097 Scedosporium apiospermum SAPIO_CDS3097 I
SETTUDRAFT_126230 Setosphaeria turcica SETTUDRAFT_126230 I
SMAC_02983 Sordaria macrospora SMAC_02983 I
SPBR_06725 Sporothrix brasiliensis SPBR_06725 I
HMPREF1624_00506 Sporothrix schenckii HMPREF1624_00506 I
S40288_08800 Stachybotrys chartarum S40288_08800 I
S40285_01877 Stachybotrys chlorohalonata S40285_01877 I
SNOG_10542 Stagonospora nodorum SNOG_10542 I
PMAA_076490 Talaromyces marneffei PMAA_076490 I
TSTA_096850 Talaromyces stipitatus TSTA_096850 I
TBLA_0D01390 Tetrapisispora blattae TBLA_0D01390 I
THITE_2131584 Thielavia terrestris THITE_2131584 I
VHEMI06514 Torrubiella hemipterigena VHEMI06514 I
TRIREDRAFT_57059 Trichoderma reesei TRIREDRAFT_57059 I
TRIVIDRAFT_42882 Trichoderma virens TRIVIDRAFT_42882 I
TEQG_06412 Trichophyton equinum TEQG_06412 I
H101_06850 Trichophyton interdigitale H101_06850 I
H102_08770 Trichophyton rubrum H102_08770 I
H105_08795 Trichophyton soudanense H105_08795 I
TESG_00798 Trichophyton tonsurans TESG_00798 I
GSTUM_00011138001 Tuber melanosporum GSTUM_00011138001 I
M407DRAFT_21315 Tulasnella calospora M407DRAFT_21315 I
UREG_04594 Uncinocarpus reesii UREG_04594 I
UV8b_5567 Ustilaginoidea virens UV8b_5567 I
Kpol_1004p50 Vanderwaltozyma polyspora Kpol_1004p50 I
PV09_05311 Verruconis gallopava PV09_05311 I
VDBG_05845 Verticillium albo atrum VDBG_05845 I
VDBG_05845 Verticillium alfalfae VDBG_05845 I
VDAG_03007 Verticillium dahliae VDAG_03007 I
BN7_6497 Wickerhamomyces ciferrii BN7_6497 I