orange1.1g001000m.g (Citrus sinensis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 orange1.1g001000m.g T143249_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g001000m C2H2 ZF 1077 1100
orange1.1g001000m C2H2 ZF 1101 1124
orange1.1g001000m C2H2 ZF 1130 1154
orange1.1g001000m C2H2 ZF 1160 1186
orange1.1g001904m C2H2 ZF 881 904
orange1.1g001904m C2H2 ZF 905 928
orange1.1g001904m C2H2 ZF 934 958
orange1.1g001904m C2H2 ZF 964 990

Links

Other C2H2 ZF family TFs
Other Citrus sinensis TFs

5 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ca_07414 Cicer arietinum Ca_07414 N 0.772
Cla002614 Citrullus lanatus Cla002614 N 0.765
PGSC0003DMG400015167 Solanum tuberosum PGSC0003DMG400015167 N 0.790
TCM_014549 Theobroma cacao TCM_014549 N 0.800