SapurV1A.2334s0030 (Salix purpurea)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 SapurV1A.2334s0030 T143513_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
STOP1
M06801_2.00 		Arabidopsis thaliana
CCTBCMCCAGDTRHHMCYY
RRGKDDYAHCTGGKGVAGG		 Dap-seq
OMalley et al.(2016)
STOP1_col_a 		0.797 0.956
STOP1
M06802_2.00 		Arabidopsis thaliana
RCCTNCMCCRGWWRN
NYWWCYGGKGNAGGY		 Dap-seq
OMalley et al.(2016)
STOP1_colamp_a 		0.797 0.956
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SapurV1A.2334s0030.1.p C2H2 ZF 330 352
SapurV1A.2334s0030.1.p C2H2 ZF 351 382

Links

Other C2H2 ZF family TFs
Other Salix purpurea TFs

75 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSFALG00000012218 Ficedula albicollis ENSFALG00000012218 N 0.000
ENSLACG00000008854 Latimeria chalumnae ENSLACG00000008854 N 0.000
ENSMPUG00000006418 Mustela putorius furo ENSMPUG00000006418 N 0.000
T Myotis lucifugus ENSMLUG00000011294 N 0.000