CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
prdm8
(
Xenopus tropicalis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
XB-GENE-984391
T145707_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CAJ83918
C2H2 ZF
527
548
CAKCNASFRMTSDLVYHMRSHH
CAJ83918
C2H2 ZF
566
588
LKCPICNESFRERHHLSRHMTSH
Links
Other
C2H2 ZF
family TFs
Other
Xenopus tropicalis
TFs
85 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PK20108.1
Cannabis sativa
PK20108.1
N
evm.TU.supercontig_19.89
Carica papaya
evm.TU.supercontig_19.89
N
Gorai.013G006100
Gossypium raimondii
Gorai.013G006100
N
Lus10000418.g
Linum usitatissimum
Lus10000418.g
N
POPTR_0019s07560
Populus trichocarpa
POPTR_0019s07560
N
29729.m002338
Ricinus communis
29729.m002338
N
SapurV1A.0707s0020
Salix purpurea
SapurV1A.0707s0020
N
TCM_045441
Theobroma cacao
TCM_045441
N