augustus_masked-nMf.1.1.scaf01525-processed-gene-0.0 (Meloidogyne floridensis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 augustus_masked-nMf.1.1.scaf01525-processed-gene-0.0 T152346_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
sptf-3
M00632_2.00 		Caenorhabditis elegans
NNMCGCCCMY
RKGGGCGKNN		 PBM
Narasimhan et al.(2015)
pTH9394 		0.786 0.809
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
augustus_masked-nMf.1.1.scaf01525-processed-gene-0.0-mRNA-1 C2H2 ZF 411 433
augustus_masked-nMf.1.1.scaf01525-processed-gene-0.0-mRNA-1 C2H2 ZF 439 463
augustus_masked-nMf.1.1.scaf01525-processed-gene-0.0-mRNA-1 C2H2 ZF 469 490

Links

Other C2H2 ZF family TFs
Other Meloidogyne floridensis TFs

47 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL017280 Aedes aegypti AAEL017280 N 0.000
AALB003072 Anopheles albimanus AALB003072 N 0.000
AARA000452 Anopheles arabiensis AARA000452 N 0.000
AATE006796 Anopheles atroparvus AATE006796 N 0.000
ACHR005336 Anopheles christyi ACHR005336 N 0.000
ACUA025715 Anopheles culicifacies ACUA025715 N 0.000
ADAC008556 Anopheles darlingi ADAC008556 N 0.000
ADIR002498 Anopheles dirus ADIR002498 N 0.000
AEPI003661 Anopheles epiroticus AEPI003661 N 0.000
AFAF010393 Anopheles farauti AFAF010393 N 0.000
AFUN009891 Anopheles funestus AFUN009891 N 0.000
AGAP001786 Anopheles gambiae AGAP001786 N 0.000
AMAM004700 Anopheles maculatus AMAM004700 N 0.000
AMEC021754 Anopheles melas AMEC021754 N 0.000
AMEM013442 Anopheles merus AMEM013442 N 0.000
AMIN000696 Anopheles minimus AMIN000696 N 0.000
AQUA004105 Anopheles quadriannulatus AQUA004105 N 0.000
ASTEI11512 Anopheles stephensi ASTEI11512 N 0.000
GB44899 Apis mellifera GB44899 N 0.000
ACEP26642 Atta cephalotes ACEP26642 N 0.000
fgenesh1_pg.62__41 Bigelowiella natans fgenesh1_pg.62__41 N 0.000
fgenesh1_pg.45__161 Bigelowiella natans fgenesh1_pg.45__161 N 0.000
estExt_fgenesh1_pg.C_130231 Bigelowiella natans estExt_fgenesh1_pg.C_130231 N 0.000
BGIBMGA010273 Bombyx mori BGIBMGA010273 N 0.000
Cflo_01219--XP_395512.3_APIME Camponotus floridanus Cflo_01219--XP_395512.3_APIME N 0.000
CpipJ_CPIJ010152 Culex pipiens CpipJ_CPIJ010152 N 0.000
CPIJ010152 Culex quinquefasciatus CPIJ010152 N 0.000
KGM_12579 Danaus plexippus KGM_12579 N 0.000
DAPPUDRAFT_327651 Daphnia pulex DAPPUDRAFT_327651 N 0.000
YQE_09239 Dendroctonus ponderosae YQE_09239 N 0.000
GF23141 Drosophila ananassae FBgn0100135 N 0.000
GG16758 Drosophila erecta FBgn0108988 N 0.000
GH15872 Drosophila grimshawi FBgn0123343 N 0.000
osa Drosophila melanogaster FBgn0261885 N 0.000
GI23637 Drosophila mojavensis FBgn0146363 N 0.000
GA26236 Drosophila pseudoobscura FBgn0247610 N 0.000
GM15347 Drosophila sechellia FBgn0170267 N 0.000
GJ24712 Drosophila virilis FBgn0211788 N 0.000
GK22507 Drosophila willistoni FBgn0224484 N 0.000
osa Drosophila yakuba FBgn0041640 N 0.000
GL50803_17540 Giardia lamblia GL50803_17540 I 0.000
Hsal_01939--XP_395512.3_APIME Harpegnathos saltator Hsal_01939--XP_395512.3_APIME N 0.000
LDEC011073 Leptinotarsa decemlineata LDEC011073 I 0.000
LCUP015823 Lucilia cuprina LCUP015823 N 0.000
LLOJ000864 Lutzomyia longipalpis LLOJ000864 N 0.000
MDOA004559 Musca domestica MDOA004559 N 0.000
PHUM080380 Pediculus humanus PHUM080380 N 0.000
PPAI002183 Phlebotomus papatasi PPAI002183 N 0.000
SINV22763 Solenopsis invicta SINV22763 N 0.000
TC013586 Tribolium castaneum TC013586 N 0.000