BTMF_0001741201 (Brugia timori)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 BTMF_0001741201 T152436_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
lin-48
M00614_2.00 		Caenorhabditis elegans
HCCGTTAB
VTAACGGD		 PBM
Narasimhan et al.(2015)
pTH9155 		0.820 0.942
ovo
M03669_2.00 		Drosophila melanogaster
DNMCCGTTA
TAACGGKNH		 SELEX
Nitta et al.(2015)
ovo_1 		0.793 0.841
ovo
M06064_2.00 		Drosophila melanogaster
CHGTTAHW
WDTAACDG		 B1H
Zhu et al.(2011)
ovo_FlyReg_FBgn0003028 		0.793 0.841
ovo
M06065_2.00 		Drosophila melanogaster
RGTHCCGTTAT
ATAACGGDACY		 B1H
Zhu et al.(2011)
ovo_SANGER_5_FBgn0003028 		0.793 0.841
ovo
M06066_2.00 		Drosophila melanogaster
DDTMCCGTTABNYN
NRNVTAACGGKAHH		 B1H
Zhu et al.(2011)
ovo_SOLEXA_5_FBgn0003028 		0.793 0.841
ovo
M02671_2.00 		Drosophila melanogaster
DCNGTTWSD
HSWAACNGH		 SELEX
Mathelier et al.(2014)
MA0126.1 		0.793 0.841
ovo
M09662_2.00 		Drosophila melanogaster
DCNGTTAMWNNDV
BHNNWKTAACNGH		 Misc
Kulakovskiy et al.(2009)
ovo 		0.793 0.841
ovo
M10373_2.00 		Drosophila melanogaster
NNNDCNGTTWSDDNN
NNHHSWAACNGHNNN		 Transfac
Matys et al.(2006)
I$OVO_01 		0.793 0.841
ovo
M10374_2.00 		Drosophila melanogaster Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
I$OVO_Q6 		0.793 0.841
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BTMF_0001741201-mRNA-1 C2H2 ZF 41 63
BTMF_0001741201-mRNA-1 C2H2 ZF 69 91
BTMF_0001741201-mRNA-1 C2H2 ZF 116 139

Links

Other C2H2 ZF family TFs
Other Brugia timori TFs

70 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MCYG_06509 Arthroderma otae MCYG_06509 I
ANIA_00835 Aspergillus nidulans CADANIAG00001825 D
EURHEDRAFT_408314 Aspergillus ruber EURHEDRAFT_408314 I
CIMG_03291 Coccidioides immitis CIMG_03291 N
MCYG_06509 Microsporum canis MCYG_06509 I
MGYG_06985 Microsporum gypseum MGYG_06985 I
TEQG_04988 Trichophyton equinum TEQG_04988 I
H101_04838 Trichophyton interdigitale H101_04838 I
TESG_04754 Trichophyton tonsurans TESG_04754 I