nAv.1.0.1.g05276 (Acanthocheilonema viteae)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 nAv.1.0.1.g05276 T155022_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
sens
M03666_2.00 		Drosophila melanogaster
TGCWSTGATTTATY
RATAAATCASWGCA		 SELEX
Nitta et al.(2015)
sens_1 		0.792 0.859
sens
M06056_2.00 		Drosophila melanogaster
AAATCACDGC
GCHGTGATTT		 B1H
Zhu et al.(2011)
sens_SANGER_10_FBgn0002573 		0.792 0.859
sens
M06057_2.00 		Drosophila melanogaster
NNNNAAATCACRGCH
DGCYGTGATTTNNNN		 B1H
Zhu et al.(2011)
sens_SOLEXA_5_FBgn0002573 		0.792 0.859
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
nAv.1.0.1.t05276-RA C2H2 ZF 97 119
nAv.1.0.1.t05276-RA C2H2 ZF 125 147
nAv.1.0.1.t05276-RA C2H2 ZF 153 175
nAv.1.0.1.t05276-RA C2H2 ZF 181 204

Links

Other C2H2 ZF family TFs
Other Acanthocheilonema viteae TFs

62 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Alligator_sinensis_CCG017359.1 Alligator sinensis Alligator_sinensis_CCG017359.1 I
ENSAPLG00000007946 Anas platyrhynchos ENSAPLG00000007946 I
HDX Anolis carolinensis ENSACAG00000014116 I
Afo_R014150 Aptenodytes forsteri Afo_R014150 I
Brh_R002803 Buceros rhinoceros Brh_R002803 I
HDX Callithrix jacchus ENSCJAG00000008295 I
Aan_R004747 Calypte anna Aan_R004747 I
HDX Canis familiaris ENSCAFG00000017380 I
HDX Cavia porcellus ENSCPOG00000014501 I
Cmyd_10021519 Chelonia mydas Cmyd_10021519 I
ENSCSAG00000010546 Chlorocebus sabaeus ENSCSAG00000010546 I
hdx Danio rerio ENSDARG00000079382 I
HDX Echinops telfairi ENSETEG00000018031 I
HDX Equus caballus ENSECAG00000024862 I
HDX Erinaceus europaeus ENSEEUG00000011626 I
HDX Felis catus ENSFCAG00000005781 I
ENSFALG00000004050 Ficedula albicollis ENSFALG00000004050 I
HDX Gallus gallus ENSGALG00000007041 I
hdx Gasterosteus aculeatus ENSGACG00000018543 I
Gfo_R008526 Geospiza fortis Gfo_R008526 I
HDX Gorilla gorilla ENSGGOG00000005551 I
HDX Homo sapiens ENSG00000165259 D
ENSLACG00000001553 Latimeria chalumnae ENSLACG00000001553 I
ENSLOCG00000015046 Lepisosteus oculatus ENSLOCG00000015046 I
HDX Loxodonta africana ENSLAFG00000028655 I
ENSP00000297977 Macaca fascicularis ENSP00000297977 I
HDX Macaca mulatta ENSMMUG00000020536 I
HDX Meleagris gallopavo ENSMGAG00000004732 I
HDX Monodelphis domestica ENSMODG00000014307 I
ENSMPUG00000006315 Mustela putorius furo ENSMPUG00000006315 I
Hdx Mus musculus ENSMUSG00000034551 D
ENSNLEG00000002624 Nomascus leucogenys ENSNLEG00000002624 I
Ogr06876 Ophisaurus gracilis Ogr06876 I
ENSONIG00000017662 Oreochromis niloticus ENSONIG00000017662 I
HDX Oryctolagus cuniculus ENSOCUG00000000903 I
hdx Oryzias latipes ENSORLG00000008466 I
HDX Otolemur garnettii ENSOGAG00000031446 I
ENSOARG00000001832 Ovis aries ENSOARG00000001832 I
HDX Pan troglodytes ENSPTRG00000022065 I
ENSPANG00000014327 Papio anubis ENSPANG00000014327 I
ENSPSIG00000003320 Pelodiscus sinensis ENSPSIG00000003320 I
ENSPFOG00000004291 Poecilia formosa ENSPFOG00000004291 I
Pvit_02951 Pogona vitticeps Pvit_02951 I
ENSPPYG00000020514 Pongo abelii ENSPPYG00000020514 I
Hdx Rattus norvegicus ENSRNOG00000037799 I
ENSSHAG00000014376 Sarcophilus harrisii ENSSHAG00000014376 I
HDX Sorex araneus ENSSARG00000009351 I
HDX Taeniopygia guttata ENSTGUG00000002499 I
hdx Takifugu rubripes ENSTRUG00000008150 I
ENSTSYG00000009619 Tarsius syrichta ENSTSYG00000009619 I
rps6kal Tetraodon nigroviridis ENSTNIG00000015774 I
HDX Tursiops truncatus ENSTTRG00000000100 I
HDX Vicugna pacos ENSVPAG00000003255 I
hdx Xenopus tropicalis XB-GENE-853748 I
ENSXMAG00000011901 Xiphophorus maculatus ENSXMAG00000011901 I