Alligator_sinensis_CCG018588.1 (Alligator sinensis)
C2HC ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01530 (zf-C2HC) IPR002515 Alligator_sinensis_CCG018588.1 T159421_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Alligator_sinensis_CCG018588.1 C2HC ZF 132 159
Alligator_sinensis_CCG018588.1 C2HC ZF 176 204
Alligator_sinensis_CCG018588.1 C2HC ZF 517 545
Alligator_sinensis_CCG018588.1 C2HC ZF 566 594
Alligator_sinensis_CCG018588.1 C2HC ZF 619 647

Links

Other C2HC ZF family TFs
Other Alligator sinensis TFs

109 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000014764 Ailuropoda melanoleuca ENSAMEG00000014764 N 0.775
ENSAPLG00000016052 Anas platyrhynchos ENSAPLG00000016052 N 0.775
MYT1L Anolis carolinensis ENSACAG00000005667 N 0.775
MYT1 Anolis carolinensis ENSACAG00000006249 N 0.717
Afo_R015783 Aptenodytes forsteri Afo_R015783 N 0.931
ENSAMXG00000001873 Astyanax mexicanus ENSAMXG00000001873 N 0.775
ENSAMXG00000002473 Astyanax mexicanus ENSAMXG00000002473 N 0.705
ENSAMXG00000013895 Astyanax mexicanus ENSAMXG00000013895 N 0.917
ENSBTAP00000004603-D1 Bos grunniens ENSBTAP00000004603-D1 N 0.907
ENSBTAP00000038860-D1 Bos grunniens ENSBTAP00000038860-D1 N 0.821
MYT1L Callithrix jacchus ENSCJAG00000007286 N 0.775
Aan_R008628 Calypte anna Aan_R008628 N 0.931
MYT1L Canis familiaris ENSCAFG00000003240 N 0.775
MYT1 Canis familiaris ENSCAFG00000013222 N 0.717
MYT1L Cavia porcellus ENSCPOG00000013246 N 0.740
Cmyd_10014849 Chelonia mydas Cmyd_10014849 N 0.750
ENSCSAG00000006922 Chlorocebus sabaeus ENSCSAG00000006922 N 0.931
ST18 Choloepus hoffmanni ENSCHOG00000010565 N 0.709
myt1la Danio rerio ENSDARG00000008209 N 0.769
MYT1L Dasypus novemcinctus ENSDNOG00000037275 N 0.931
Myt1l Dipodomys ordii ENSDORG00000004076 N 0.726
MYT1L Equus caballus ENSECAG00000014657 N 0.775
MYT1L Erinaceus europaeus ENSEEUG00000013615 N 0.775
MYT1L Felis catus ENSFCAG00000013984 N 0.775
ENSFALG00000002053 Ficedula albicollis ENSFALG00000002053 N 0.931
ENSGMOG00000002744 Gadus morhua ENSGMOG00000002744 N 0.818
ENSGMOG00000006285 Gadus morhua ENSGMOG00000006285 N 0.889
ENSGMOG00000009083 Gadus morhua ENSGMOG00000009083 N 0.821
ENSGMOG00000012782 Gadus morhua ENSGMOG00000012782 N 0.917
myt1la Gasterosteus aculeatus ENSGACG00000011952 N 0.769
ENSGACG00000012816 Gasterosteus aculeatus ENSGACG00000012816 N 0.821
Gfo_R002934 Geospiza fortis Gfo_R002934 N 0.931
MYT1L Gorilla gorilla ENSGGOG00000026335 N 0.827
Hsal_01303--XP_394358.3_APIME Harpegnathos saltator Hsal_01303--XP_394358.3_APIME N 0.833
HMEL002385 Heliconius melpomene HMEL002385 N 0.833
MYT1L Homo sapiens ENSG00000186487 I 0.775
ENSSTOG00000001345 Ictidomys tridecemlineatus ENSSTOG00000001345 N 0.775
ENSSTOG00000016500 Ictidomys tridecemlineatus ENSSTOG00000016500 N 0.874
ENSLACG00000002582 Latimeria chalumnae ENSLACG00000002582 N 0.778
ENSLACG00000014372 Latimeria chalumnae ENSLACG00000014372 N 0.924
ENSLOCG00000017216 Lepisosteus oculatus ENSLOCG00000017216 N 0.924
MYT1L Loxodonta africana ENSLAFG00000002751 N 0.803
ENSLAFG00000004212 Loxodonta africana ENSLAFG00000004212 N 0.743
ENSMMUP00000012198 Macaca fascicularis ENSMMUP00000012198 N 0.775
MYT1L Macaca mulatta ENSMMUG00000009310 I 0.775
ENSMEUG00000001386 Macropus eugenii ENSMEUG00000001386 N 0.708
MYT1 Meleagris gallopavo ENSMGAG00000006569 N 0.753
MYT1L Meleagris gallopavo ENSMGAG00000013972 N 0.775
MYT1 Microcebus murinus ENSMICG00000003327 N 0.709
ST18 Microcebus murinus ENSMICG00000003705 N 0.846
MYT1L Monodelphis domestica ENSMODG00000014378 N 0.775
ENSMPUG00000008741 Mustela putorius furo ENSMPUG00000008741 N 0.717
Myt1 Mus musculus ENSMUSG00000010505 N 1.000
Myt1l Mus musculus ENSMUSG00000061911 N 0.775
Myotis_brandtii_MYT1L_10020908 Myotis brandtii Myotis_brandtii_MYT1L_10020908 N 0.931
MYT1L Myotis lucifugus ENSMLUG00000012642 N 0.764
NV11201 Nasonia vitripennis NV11201 N 0.833
ENSNLEG00000008466 Nomascus leucogenys ENSNLEG00000008466 N 0.775
ENSNLEG00000010244 Nomascus leucogenys ENSNLEG00000010244 N 0.717
Ogr14932 Ophisaurus gracilis Ogr14932 N 0.705
ENSONIG00000000499 Oreochromis niloticus ENSONIG00000000499 N 0.787
ENSONIG00000011639 Oreochromis niloticus ENSONIG00000011639 N 0.719
ENSONIG00000011665 Oreochromis niloticus ENSONIG00000011665 N 0.910
ENSONIG00000018694 Oreochromis niloticus ENSONIG00000018694 N 0.931
ENSOANG00000009861 Ornithorhynchus anatinus ENSOANG00000009861 N 0.705
MYT1L Oryctolagus cuniculus ENSOCUG00000016764 N 0.931
myt1b Oryzias latipes ENSORLG00000002252 N 0.803
ST18 Oryzias latipes ENSORLG00000017500 N 0.750
MYT1L Oryzias latipes ENSORLG00000017852 N 0.910
myt1la Oryzias latipes ENSORLG00000018130 N 0.775
myt1a Oryzias latipes ENSORLG00000020139 N 0.828
MYT1L Otolemur garnettii ENSOGAG00000010219 N 0.931
ENSOARG00000005304 Ovis aries ENSOARG00000005304 N 0.873
MYT1L Pan troglodytes ENSPTRG00000011611 N 0.775
ENSPANG00000005639 Papio anubis ENSPANG00000005639 N 0.705
ENSPSIG00000005126 Pelodiscus sinensis ENSPSIG00000005126 N 0.775
ENSPFOG00000002613 Poecilia formosa ENSPFOG00000002613 N 0.769
ENSPFOG00000005354 Poecilia formosa ENSPFOG00000005354 N 0.910
ENSPFOG00000017045 Poecilia formosa ENSPFOG00000017045 N 0.951
Pvit_03612 Pogona vitticeps Pvit_03612 N 0.931
ENSPPYG00000012686 Pongo abelii ENSPPYG00000012686 N 0.775
MYT1 Procavia capensis ENSPCAG00000005084 N 0.785
ST18 Procavia capensis ENSPCAG00000014437 N 0.854
MYT1L Procavia capensis ENSPCAG00000015124 N 0.773
MYT1 Pteropus vampyrus ENSPVAG00000017398 N 0.707
Myt1l Rattus norvegicus ENSRNOG00000004269 N 0.763
Myt1 Rattus norvegicus ENSRNOG00000017346 N 0.717
Sakowv30043989m.g Saccoglossus kowalevskii Sakowv30043989m.g N 0.734
ENSSHAG00000015142 Sarcophilus harrisii ENSSHAG00000015142 N 0.827
ENSSHAG00000015433 Sarcophilus harrisii ENSSHAG00000015433 N 0.931
MYT1L Sorex araneus ENSSARG00000012319 N 0.775
SMAR006962 Strigamia maritima SMAR006962 N 0.801
MYT1L Sus scrofa ENSSSCG00000029334 N 0.775
MYT1 Takifugu rubripes ENSTRUG00000002124 N 0.708
MYT1L Takifugu rubripes ENSTRUG00000003414 N 0.903
ST18 Takifugu rubripes ENSTRUG00000006078 N 0.743
myt1a Takifugu rubripes ENSTRUG00000007068 N 0.743
myt1la Takifugu rubripes ENSTRUG00000015790 N 0.924
ENSTSYG00000008880 Tarsius syrichta ENSTSYG00000008880 N 0.812
myt1b Tetraodon nigroviridis ENSTNIG00000003105 N 0.711
myt1la Tetraodon nigroviridis ENSTNIG00000010716 N 0.769
MYT1 Tupaia belangeri ENSTBEG00000001344 N 0.734
MYT1L Tursiops truncatus ENSTTRG00000008589 N 0.793
Tal_R003131 Tyto alba Tal_R003131 N 0.931
AAI70264 Xenopus laevis AAI70264 N 0.717
myt1.S Xenopus laevis XB-GENE-1009978 N 0.717
XP_002936343 Xenopus tropicalis XP_002936343 N 0.769
XP_002942428 Xenopus tropicalis XP_002942428 N 0.717
ENSXMAG00000002367 Xiphophorus maculatus ENSXMAG00000002367 N 0.769