CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SMU15028607
(
Schmidtea mediterranea
)
C2HC ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01530 (zf-C2HC)
IPR002515
SMU15028607
T159525_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ztf-11
M00650_2.00
Caenorhabditis elegans
VAAGTTTN
NAAACTTB
PBM
Narasimhan et al.(2015)
pTH9925
0.842
0.842
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SMU15028607
C2HC ZF
74
101
KCPTPGCDGVGHATGLYSHHRSLSGCPR
SMU15028607
C2HC ZF
118
146
KCPTVGCTGRGHVNGNRTSHRSLSGCPIA
Links
Other
C2HC ZF
family TFs
Other
Schmidtea mediterranea
TFs
70 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACYPI31510
Acyrthosiphon pisum
ACYPI31510
I
0.825
ACYPI31512
Acyrthosiphon pisum
ACYPI31512
I
0.724
ENSAMEG00000015014
Ailuropoda melanoleuca
ENSAMEG00000015014
I
0.842
ANCCEY_04739
Ancylostoma ceylanicum
ANCCEY_04739
I
0.842
ANCDUO_13968
Ancylostoma duodenale
ANCDUO_13968
I
0.842
ACAC_0000050701
Angiostrongylus cantonensis
ACAC_0000050701
I
0.842
ACOC_0000924001
Angiostrongylus costaricensis
ACOC_0000924001
I
0.842
AATE018011
Anopheles atroparvus
AATE018011
I
0.741
AATE000335
Anopheles atroparvus
AATE000335
I
0.807
ACOM027979
Anopheles coluzzii
ACOM027979
I
0.741
ADAC002899
Anopheles darlingi
ADAC002899
N
0.706
AFAF020264
Anopheles farauti
AFAF020264
I
0.825
AFAF001557
Anopheles farauti
AFAF001557
I
0.741
AMAM009924
Anopheles maculatus
AMAM009924
I
0.741
AMAM005266
Anopheles maculatus
AMAM005266
N
0.706
AMAM003778
Anopheles maculatus
AMAM003778
I
0.825
ASU_06642
Ascaris suum
ASU_06642
I
0.842
ACEP14857
Atta cephalotes
ACEP14857
I
0.789
ENSBTAG00000003540
Bos taurus
ENSBTAG00000003540
I
0.877
e_gw.598.24.1
Branchiostoma floridae
e_gw.598.24.1
I
0.737
BXY_0842900
Bursaphelenchus xylophilus
BXY_0842900
I
0.807
CBN09920
Caenorhabditis brenneri
CBN09920
I
0.842
CBN18838
Caenorhabditis brenneri
CBN18838
I
0.842
CBG03854
Caenorhabditis briggsae
CBG03854
I
0.842
ztf-11
Caenorhabditis elegans
WBGene00009939
D
0.842
CJA03417
Caenorhabditis japonica
CJA03417
I
0.842
CRE08084
Caenorhabditis remanei
CRE08084
I
0.842
CapteG130298
Capitella teleta
CapteG130298
I
0.811
Cmyd_10014184
Chelonia mydas
Cmyd_10014184
I
0.877
YQE_11977
Dendroctonus ponderosae
YQE_11977
I
0.741
DICVIV_01967
Dictyocaulus viviparus
DICVIV_01967
I
0.842
nDi.2.2.2.g06992
Dirofilaria immitis
nDi.2.2.2.g06992
I
0.842
CG43689
Drosophila melanogaster
FBgn0263772
I
0.724
GI16394
Drosophila mojavensis
FBgn0139142
I
0.724
GL14771
Drosophila persimilis
FBgn0152375
I
0.724
EVEC_0001307101
Enterobius vermicularis
EVEC_0001307101
I
0.842
HHAL001110-PA
Halyomorpha halys
HHAL001110-PA
I
0.724
HelroG85268
Helobdella robusta
HelroG85268
I
0.860
Hba_17025
Heterorhabditis bacteriophora
Hba_17025
I
0.842
ST18
Homo sapiens
ENSG00000147488
I
0.842
MYT1L
Homo sapiens
ENSG00000186487
I
0.877
HDID_0000016901
Hymenolepis diminuta
HDID_0000016901
N
0.719
ISCW018799
Ixodes scapularis
ISCW018799
I
0.877
ENSLACG00000008399
Latimeria chalumnae
ENSLACG00000008399
I
0.860
nLs.2.1.2.g09672
Litomosoides sigmodontis
nLs.2.1.2.g09672
I
0.842
LCUP002242
Lucilia cuprina
LCUP002242
I
0.724
MYT1L
Macaca mulatta
ENSMMUG00000009310
I
0.877
Minc05804
Meloidogyne incognita
Minc05804
I
0.772
NECAME_10938
Necator americanus
NECAME_10938
I
0.842
NBR_0001165301
Nippostrongylus brasiliensis
NBR_0001165301
I
0.842
Ocbimv22028295m.g
Octopus bimaculoides
Ocbimv22028295m.g
I
0.840
Ocbimv22028296m.g
Octopus bimaculoides
Ocbimv22028296m.g
N
0.707
OESDEN_24201
Oesophagostomum dentatum
OESDEN_24201
I
0.842
WBGene00238210
Onchocerca volvulus
WBGene00238210
I
0.842
PTRK_0001788400
Parastrongyloides trichosuri
PTRK_0001788400
I
0.825
RSKR_0000214800
Rhabditophanes kr3021
RSKR_0000214800
I
0.825
nRc.2.0.1.g21954
Romanomermis culicivorax
nRc.2.0.1.g21954
N
0.719
Smp_168610
Schistosoma mansoni
Smp_168610
N
0.772
L596_g1281
Steinernema carpocapsae
L596_g1281
I
0.825
L889_g28085
Steinernema feltiae
L889_g28085
I
0.825
L893_g1446
Steinernema glaseri
L893_g1446
I
0.825
SPAL_0000489100
Strongyloides papillosus
SPAL_0000489100
I
0.807
SPAL_0000892700
Strongyloides papillosus
SPAL_0000892700
I
0.825
SSTP_0000574400
Strongyloides stercoralis
SSTP_0000574400
I
0.825
SVE_1935100
Strongyloides venezuelensis
SVE_1935100
I
0.825
SVE_1952800
Strongyloides venezuelensis
SVE_1952800
I
0.807
SMUV_0000666101
Syphacia muris
SMUV_0000666101
I
0.842
ENSTGUG00000014218
Taeniopygia guttata
ENSTGUG00000014218
I
0.825
TELCIR_22038
Teladorsagia circumcincta
TELCIR_22038
I
0.842
TELCIR_26151
Teladorsagia circumcincta
TELCIR_26151
I
0.842